Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1618 ATGGGTTTCTCCTCTCTTCACGTCTGCATGGAGTCATCATCAGATCCTTGGCTTCAGGGCACAATTCACGAGGAATCTGCAGGGATGGATTCTTCTTCTTCTCCATCAGGGGACATGATTGCATGCTCAAGGCCCATGACAGAGAGGAAGCTAAGACCCCCGCAAGACCAGGCTCTCAAGTGCCCGAGGTGTGACTCAACCCACACCAAGTTCTGCTACTACAACAACTACAGCCTCTCCCAGCCAAGGTACTTCTGCAAGGCATGCAGAAGGTACTGGACCAAAGGTGGCACTCTCAGGAACATCCCAGTTGGTGGTGGCTGCAGAAAGAACAAGAAAGTTTCTTCCAAGAAATCCAACGACCAACCACCTATTATTAACAACAATCAAAACCAAGCACACCCTGCAGGACCCTCTTACCTTAACCATCACCCCAAAGAACTTCAGCTTTCTAATTTCCCAGATGTGCAATATTCTCACATCAGCAATTTGCTAGGGACTAATGCTGGGGCATTAATGGGAAACCCAAATTTTATGGAGAGTAAGTATAGTATGGGTATGGTTGAGAACCCGAGGCATATGGACCTCATGGAAAGTAGTAAGATGGATGGTGTGATCAGAAGTAGTTCTAGGAATCTTGATTTTTTTGGAATGAATAGTGATGTGGTGAGTGTTGGTGTTGGGGTTGGAGATGTGAATGGTTACAATAATATGTTGCCACTAAATTATCAAGGCTTATGCTCTTCAGCATTTAGGGGCATGTCCCTTGATGGGAACAACAATAGTGGGAGTTACATAATGGAGTCTTGCCAGAGATTTATGTTGCCTTCTGACTCAGGTGACAACCAATATAGTTTAATTGATGATGTGAAGCCAAACCCGAGGCTAGTGTCCCTTGAATGGCAAGAAATGCAACAGGGTCGCTCTGATGGAAAAGAGCCATTTGGATATCTTAACGGCCCAGGGTCATGGACTGGCGTCATGAACGGCTATGGATCTTCCACAACAAACCCTTTGGTCTAG 1023 0.4585 MGFSSLHVCMESSSDPWLQGTIHEESAGMDSSSSPSGDMIACSRPMTERKLRPPQDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKACRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNDQPPIINNNQNQAHPAGPSYLNHHPKELQLSNFPDVQYSHISNLLGTNAGALMGNPNFMESKYSMGMVENPRHMDLMESSKMDGVIRSSSRNLDFFGMNSDVVSVGVGVGDVNGYNNMLPLNYQGLCSSAFRGMSLDGNNNSGSYIMESCQRFMLPSDSGDNQYSLIDDVKPNPRLVSLEWQEMQQGRSDGKEPFGYLNGPGSWTGVMNGYGSSTTNPLV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1618 340 MobiDBLite consensus disorder prediction 104 142 - -
Dod05g1618 340 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 334 IPR045174 GO:0003700|GO:0006355
Dod05g1618 340 Pfam Dof domain, zinc finger 56 113 IPR003851 GO:0003677|GO:0006355
Dod05g1618 340 PANTHER - 18 334 - -
Dod05g1618 340 MobiDBLite consensus disorder prediction 118 137 - -
Dod05g1618 340 ProSitePatterns Zinc finger Dof-type signature. 61 97 IPR003851 GO:0003677|GO:0006355
Dod05g1618 340 ProSiteProfiles Zinc finger Dof-type profile. 59 113 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1618 Dod-Chr5 41267508 41269804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1618 1 340 C2C2-Dof Transcription Factor Family AT5G62940 37.179 1.73e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod05g1618 zf-Dof 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1618 - - gmx:778107 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1618 05 41267508 41269804 Dod09g0275 09 4087967 4089676 PCT