Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0991 ATGCCGTTGTCGGATTCCGGCGAGAGCCTCCGAGCGACCAAGCCCCAAAATCCTGCGGGAGCTCTGCCGCCGACGGAGCAAGAGAACCTGCCGTGCCCCCGTTGCGACTCCACCAACACCAAGTTCTGCTACTACAACAACTACAACTACTCCCAGCCCCGCCACTTCTGCAAGTCCTGTCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGACATCCCCGTCGGCGGCGGCAGCCGGAAAAACGCCAAACGCTCCCGTACCAACCACCACCAGCACGCCTCCGCTGCCACGTCATCATTTTCCTCTTCCACCGTCACTTCAGCACCTATACAGGACCATCACCACCCCGCCTTGTCGGCGATGGTTCCCGCGGTCGCGACCTTCGGGATTGCAGGTGGTGGAGTTGACCATGGTGAAGTGAAACAGAATGTGAACGTCTGCGGGAGCTTCACTTCGTTGCTGAGCAACAACGCCATCAACACCGCGCAAGGTTCCGGGTTTCTGGCTCTTAGCGGCGGCTTCGGGCTTGGGCTCGAAGATATGGTCTTCGGGCTTGGGAGAGCGGGCTGGGCCTACCCCGGGATGGTGGATGGAACTAATGTTGGCGGTGGCGGCGTTGCCGCTTCAGGGTCGTGGCAGTTGGAAGCTGGCGAAGGTGGCGAATGCGGGTTTGTAGGTGGAGACTGCTTCTCTTGGCCAGGACCTGCGATTTCAACACCAGGAAATGGTCTTAAATGA 741 0.6059 MPLSDSGESLRATKPQNPAGALPPTEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTNHHQHASAATSSFSSSTVTSAPIQDHHHPALSAMVPAVATFGIAGGGVDHGEVKQNVNVCGSFTSLLSNNAINTAQGSGFLALSGGFGLGLEDMVFGLGRAGWAYPGMVDGTNVGGGGVAASGSWQLEAGEGGECGFVGGDCFSWPGPAISTPGNGLK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0991 246 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 4 243 - -
Dod05g0991 246 MobiDBLite consensus disorder prediction 71 110 - -
Dod05g0991 246 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Dod05g0991 246 MobiDBLite consensus disorder prediction 1 31 - -
Dod05g0991 246 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Dod05g0991 246 MobiDBLite consensus disorder prediction 92 110 - -
Dod05g0991 246 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Dod05g0991 246 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 243 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0991 Dod-Chr5 23659987 23662794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0991 1 246 C2C2-Dof Transcription Factor Family AT3G50410 46.617 4.07e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod05g0991 zf-Dof 8.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0991 - - gmx:778095 278.485