Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3082 ATGGCGGCAAACGCTCTCTCCTCAGCTCCCGCATTTCGCGTTCTCACCGTACTCCTGCTCCTGCTGCTGCTCCACCCAACCGCCGCCGGCCATGACTACCACGACGCACTCCGCAAGAGCATCCTCTTCTTCGAAGGCCAGCGCTCAGGCAAACTCCCTCCCGACCAGCGCCTCCGATGGCGCCGCGACTCCGCATTGCACGACGGTGCCACAGTCGGGGTGGACTTGAGCGGAGGGTACTACGACGCCGGCGACAACATAAAGTTCGGGTTTCCGATGGCGTTCACGACGACGATGCTGGCGTGGAGCGTGATAGACTTCGGGAGGAGCATGGGCCCTGAGCTCGGGAACGCGTTGAAGGCGGTGAAGTGGGGGACGGATTACCTGGTGAAGGCGACGTCGAGGGTGGGGGAGGGTGTGGTGTTCGTGCAGGTCGGAGACCCTTACTCGGATCACAACTGCTGGGAGAGGCCCGAGGACATGGACACACTACGCACCGTTTTCAAGGTGGATGGGTCCCACCCTGGCTCTGACGTGGCAGGAGAAACCGCCGCTGCTCTTGCCGCTGCCTCCATCGTCTTCAGATCACGTGACCCCTCCTACTCTACGTTCCTCCTTAATCGAGCCGTTACGGTGTTCGAGTTTGCTGACAGGCATCGTGGTGCATACAGTAACAGCCTGCGCCGCGCAGCCTGCCCATTTTACTGCGACGTCAATGGTTACCAGGATGAGCTGCTATGGGCTGCGGCGTGGTTGCACAAGGCATCGCGTAGGCGTCAGTACAGAGAATACATTGTGAGGAACGAGGTAGTGTTGAGGGCTGGGGACACCATTAATGAGTTTGGTTGGGATAACAAGCATGCCGGGATTAATGTCCTCATTTCCAAGGAGGTGTTGATGGGAAGAGCAAACTATTTTACGTCGTTCAAGCAAAACGCAGATGGATTTATCTGTTCAATATTGCCTGGAATTTCTCACCCTCAAGTTCAATATTCCCCAGGTGGTCTTATTTTCAAGGCCGGAGGAAGTAACATGCAGCATGTAACATCCCTGTCTTTCCTCCTTCTAGCTTATTCCAACTACCTAAGCCACGCCAATAAGGTTGTGCCATGTGGCGAGACCACTGCCACGCCAGGTCTACTCAAACACCTAGCCAAACGCCAGGTTGACTACATTCTTGGGGATAACCCGTTGGGAATGTCGTACATGGTTGGATACGGTGCACACTACCCGCAGAGGATACATCACAGGGCAAGCTCGCTTCCTTCGATAACGGCCCACCCAGCCCACATTGGCTGCAAAGCAGGCTCTCGCTATTTCCTAAGCCCAAATCCCAACCCGAATGTGTTGGTTGGAGCGGTGGTTGGTGGGCCTACCAACAACACAGATTCCTTCCCTGATTCCAGGCCTTTCTTTCAGGAGTCAGAGCCCACCACATACATCAATGCTCCTCTTGTTGGCCTGCTCGCTTTCTTCACAGCCCACTCTTAA 1491 0.5573 MAANALSSAPAFRVLTVLLLLLLLHPTAAGHDYHDALRKSILFFEGQRSGKLPPDQRLRWRRDSALHDGATVGVDLSGGYYDAGDNIKFGFPMAFTTTMLAWSVIDFGRSMGPELGNALKAVKWGTDYLVKATSRVGEGVVFVQVGDPYSDHNCWERPEDMDTLRTVFKVDGSHPGSDVAGETAAALAAASIVFRSRDPSYSTFLLNRAVTVFEFADRHRGAYSNSLRRAACPFYCDVNGYQDELLWAAAWLHKASRRRQYREYIVRNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGRANYFTSFKQNADGFICSILPGISHPQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGETTATPGLLKHLAKRQVDYILGDNPLGMSYMVGYGAHYPQRIHHRASSLPSITAHPAHIGCKAGSRYFLSPNPNPNVLVGAVVGGPTNNTDSFPDSRPFFQESEPTTYINAPLVGLLAFFTAHS* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3082 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Dod04g3082 496 PANTHER ENDOGLUCANASE 10 496 - -
Dod04g3082 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 465 483 IPR033126 -
Dod04g3082 496 SUPERFAMILY Six-hairpin glycosidases 31 494 IPR008928 GO:0005975
Dod04g3082 496 Pfam Glycosyl hydrolase family 9 33 489 IPR001701 GO:0004553|GO:0005975
Dod04g3082 496 PANTHER ENDO-1,4-BETA-GLUCANASE 10 496 - -
Dod04g3082 496 Gene3D - 29 496 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3082 Dod-Chr4 54547077 54552385 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3082 04 54547077 54552385 Dod04g3082 04 54547077 54552385 ECH