Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1909 ATGGAGAACAACCCAGTTCAGCTTTTTCCTCATCTCACTGTGACACTCCTCCTTTTGATGACTATGTTGTTCCCTATTATGACTGAAGAAGCTGCACCACCAGTTTCATCCATCAAGACTGATGCACAGGCTCTTCTCTTGTTCAAAAAGATGGTTCAGAAGGATCCAAATAGAGTATTGTCAGGTTGGCAGCTGAACAGGACCCCATGCAGCTGGTATGGTGTTTCTTGCACCTCAGGAAGAGTTACTCAGCTTGATCTTAGTGGGAATAGTTTGGCTGGCGCTATTTCTCTTGATCCTTTATCTGCTCTAGATATGTTGTCTGTTCTCAAGCTGTCTGTGAATTCATTTTCTGTAAATTCTACTTCCATGCTTAAGCTTCCATATAGTTTGACACAGCTAGATCTATCCTTTGGTGGAGTTTCAGGTCCTGTCCCTGAGAACTTCTTCTCCAGGTGTCCAAACCTTGTTGTTGTGAATCTTGCTTACAACAACTTGACTGGCCCTATTCCTGAAAACTTCATGCGGAATTCTGATAAGCTTCAGTCCCTTGACCTCTCTTCCAACAATTTGACAGGCTCAATTTCAGGCCTGAAATTTGAGTGCAACTCCTTGTTGCAGCTTGATCTATCTGGGAACCTTTTATCAGACTCAATCCCAATCTCTTTGTCCAACTGCACCAGCCTTAAGAGTTTGAATTTAGGCAACAATTTGATTTCTGGGGAGATCCCGAAGGCTTTGGGGCAGCTAAACAACCTTCAAACTTTGGATCTTTCCCACAATCAACTCAATGGCTGGATCCCTTTTGAGTTGGGGAATGCATGTGCTTCCCTTGTAGAACTTAGCCTTTCTTTCAACAACATCTCAGGTTCAATCCCAACCAGTTTCTCTTCTTGCACTTGGCTGCAACTTGTTGACATATCCAACAACAATATGTCAGGTCCATTACCAGATTCAATCTTTCAGAACCTTGGATCATTGCTGGAACTGAGGTTGGGAAATAATGCCATCTTTGGGCCATTTCCATCTTCAATATCTTCCTGCAAAAAGCTGAGGATTGTGGATTTCAGTTCAAACAAGTTTTATGGATCTATCCCCAGAGATATATGTCCAGGTGCAGCCTCACTTGAGGAGCTGAGAATGCCAGATAATCTCATCACAGGAGAAATCCCAGCTGAACTGTCAAAGTGCTCACAGCTGAAGACACTTGATTTTAGTCTCAACTATCTCAATGGTTCAATCCCTGAAGAGCTTGGACAGCTTCAGAATCTTCAGCAGCTTATAGCATGGTTCAATGGCTTGGAAGGAAAGATTCCACCAAAGTTGGGTCAATGCAAGAATCTTAAGGATCTTATACTGAATAACAACCACCTCGCTGGTGGAATTCCCAGAGAGTTGTTCAATTGCAGCAACCTTGAATGGATATCACTGACAAGCAACGAACTCACCGGTGAAATACCGCGGGAGTTCGGCCTCTTGACAAGGTTAGCAGTTCTGCAGCTTGGAAATAACAGCTTCACCGGGGAGATACCAGGGGAGCTAGCAAATTGCAGCAGTTTGGTGTGGTTGGACTTGAACAGCAACAAGCTCACAGGTGAGATCCCACCAAGACTTGGCAGGCAGCTAGGAGCAAAATCATTGTTTGGCATCCTGTCAGGAAACACTCTGGTGTTCGTGAGGAATGTTGGAAACTCTTGCAAAGGAGTTGGAGGTTTGTTAGAATTCTCTGGAATTAGGCCTGAGAGGCTCTTGCAGGTACCAACATTGAGGACCTGTGATTTCACTAGACTCTATTCCGGTGCTGTCCTCAGCCTGTTCACAAAGTACCAGACTCTGGAGTATCTTGATCTTTCATACAACGAGCTTCGCGGAAGAATCCCAGAAGAATTTGGAGACATGGTGGCCTTGCAGGTTCTCGAGTTGTCTCACAATCAGTTATCCGGAGAGATCCCTTCGTCACTTGGCCAGCTCAAGAATTTGGGTGTGTTTGATGCATCACACAATAGGCTGCAGGGTCATATCCCAGACTCATTCTCAAACCTCTCATTCTTGGTGCAGATTGATCTGTCTAACAATGAGTTAACAGGGCAAATCCCGTCTAGGGGCCAACTGAGCACACTTCCAGCTTCCCAGTATGCAAACAACCCTGGCCTCTGTGGTGTTCCATTGCCCGAATGCCGGAACGACAACAGCCAAACCCCAACAAGTCCAAGTGAGGACCTCACCGGAGGAGGCCATAGAAGAGCGGCTGCATCATGGGCTAATAGTATTGTCCTGGGAATCCTCATATCTGTTGCTTCTGTATGTATCTTAATTGTGTGGGCAATTGCAATGCGTGCAAGAAGGAAGGAGGCTGAGGAGGTCAAGATGCTTAATAGCTTGCAAGCATGCCATGCTGCCACAACATGGAAGATTGACAAGGAGAAAGAGCCCCTAAGCATCAATGTGGCAACCTTTCAGAGGCAGCTAAGGAAGCTCAAGTTCTCACAGTTGATTGAAGCAACCAATGGCTTCTCGGCAGCAAGCCTTATTGGGTGTGGTGGCTTTGGTGAAGTGTTCAAGGCCACACTCAAGGACGGGTCAAGTGTCGCGATAAAGAAGCTCATTAGGCTGAGCTGCCAGGGAGACAGAGAATTCATGGCTGAGATGGAAACCTTGGGGAAGATCAAGCACAGAAACCTTGTCCCTTTATTGGGATACTGCAAAGTTGGTGAAGAGAGGCTCCTTGTTTATGAGTACATGGAGTATGGAAGCCTAGAGGAAATGCTTCATGGGAGAACAAAGACGCGGGATAGGCGAATCTTGACATGGGAAGAGAGGAAAAAGGTTGCAAGAGGTGCTGCTAAGGGGCTTTGTTTCCTGCACCACAATTGCATCCCTCACATCATACACAGGGACATGAAATCAAGCAATGTGCTACTTGACCATGAAATGGAATCGAGGGTCTCGGATTTCGGAATGGCAAGGCTAATAAGTGCACTTGACACACACCTTAGTGTGAGCACACTGGCAGGAACACCTGGTTATGTTCCACCGGAGTACTACCAAAGTTTCAGGTGCACTGCCAAGGGTGATGTTTACTCATTTGGGGTTGTGATGCTGGAACTGCTCACTGGGAAGCGCCCTACTGACAAGGAGGACTTTGGTGACACGAACTTGGTGGGTTGGGCCAAGATGAAGGTGCGTGAAGGGAAGCAAATGGAAGTGATTGACCCTGACTTGCTCTTAGTGACTCAAGGAACAGATGAAGCAGAAGTCAAAGAAGTGAAGGAGATGATTCGATACTTGGAGATCACATTGCAGTGTGTTGATGACTCGTCTTCCAAGAGGCCAAACATGTTGCAGGTAGTGGCCATGCTGAGAGAGCTTATGCCTGGATCAAATGAAGGAAGCAGCAACAGTGCTTGA 3408 0.463 MENNPVQLFPHLTVTLLLLMTMLFPIMTEEAAPPVSSIKTDAQALLLFKKMVQKDPNRVLSGWQLNRTPCSWYGVSCTSGRVTQLDLSGNSLAGAISLDPLSALDMLSVLKLSVNSFSVNSTSMLKLPYSLTQLDLSFGGVSGPVPENFFSRCPNLVVVNLAYNNLTGPIPENFMRNSDKLQSLDLSSNNLTGSISGLKFECNSLLQLDLSGNLLSDSIPISLSNCTSLKSLNLGNNLISGEIPKALGQLNNLQTLDLSHNQLNGWIPFELGNACASLVELSLSFNNISGSIPTSFSSCTWLQLVDISNNNMSGPLPDSIFQNLGSLLELRLGNNAIFGPFPSSISSCKKLRIVDFSSNKFYGSIPRDICPGAASLEELRMPDNLITGEIPAELSKCSQLKTLDFSLNYLNGSIPEELGQLQNLQQLIAWFNGLEGKIPPKLGQCKNLKDLILNNNHLAGGIPRELFNCSNLEWISLTSNELTGEIPREFGLLTRLAVLQLGNNSFTGEIPGELANCSSLVWLDLNSNKLTGEIPPRLGRQLGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLLQVPTLRTCDFTRLYSGAVLSLFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPECRNDNSQTPTSPSEDLTGGGHRRAAASWANSIVLGILISVASVCILIVWAIAMRARRKEAEEVKMLNSLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRTKTRDRRILTWEERKKVARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWAKMKVREGKQMEVIDPDLLLVTQGTDEAEVKEVKEMIRYLEITLQCVDDSSSKRPNMLQVVAMLRELMPGSNEGSSNSA* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1909 1135 SUPERFAMILY L domain-like 575 723 - -
Dod04g1909 1135 ProSitePatterns Protein kinases ATP-binding region signature. 844 867 IPR017441 GO:0005524
Dod04g1909 1135 SMART serkin_6 838 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1909 1135 ProSiteProfiles Leucine-rich repeat profile. 180 202 IPR001611 GO:0005515
Dod04g1909 1135 SMART LRR_sd22_2 178 200 - -
Dod04g1909 1135 SMART LRR_sd22_2 250 271 - -
Dod04g1909 1135 SMART LRR_sd22_2 657 683 - -
Dod04g1909 1135 Gene3D Transferase(Phosphotransferase) domain 1 914 1133 - -
Dod04g1909 1135 ProSiteProfiles Protein kinase domain profile. 838 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1909 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Dod04g1909 1135 Pfam Brassinosteroid receptor island domain 548 606 IPR045381 -
Dod04g1909 1135 SMART LRR_typ_2 250 274 IPR003591 -
Dod04g1909 1135 SMART LRR_typ_2 446 469 IPR003591 -
Dod04g1909 1135 SMART LRR_typ_2 324 348 IPR003591 -
Dod04g1909 1135 SMART LRR_typ_2 633 657 IPR003591 -
Dod04g1909 1135 SMART LRR_typ_2 493 517 IPR003591 -
Dod04g1909 1135 SMART LRR_typ_2 421 445 IPR003591 -
Dod04g1909 1135 SMART LRR_typ_2 518 541 IPR003591 -
Dod04g1909 1135 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 33 1124 - -
Dod04g1909 1135 Gene3D - 551 607 - -
Dod04g1909 1135 SUPERFAMILY L domain-like 40 313 - -
Dod04g1909 1135 SUPERFAMILY RNI-like 237 537 - -
Dod04g1909 1135 Pfam Leucine Rich repeat 180 193 IPR001611 GO:0005515
Dod04g1909 1135 Pfam Protein tyrosine and serine/threonine kinase 842 1119 IPR001245 GO:0004672|GO:0006468
Dod04g1909 1135 ProSiteProfiles Leucine-rich repeat profile. 252 273 IPR001611 GO:0005515
Dod04g1909 1135 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 33 1124 - -
Dod04g1909 1135 MobiDBLite consensus disorder prediction 724 745 - -
Dod04g1909 1135 Gene3D Phosphorylase Kinase; domain 1 798 913 - -
Dod04g1909 1135 CDD STKc_IRAK 844 1123 - -
Dod04g1909 1135 Gene3D Ribonuclease Inhibitor 40 151 IPR032675 -
Dod04g1909 1135 Gene3D Ribonuclease Inhibitor 152 726 IPR032675 -
Dod04g1909 1135 MobiDBLite consensus disorder prediction 726 740 - -
Dod04g1909 1135 Pfam BspA type Leucine rich repeat region (6 copies) 292 386 IPR026906 -
Dod04g1909 1135 Pfam Leucine rich repeat 205 263 IPR001611 GO:0005515
Dod04g1909 1135 Pfam Leucine rich repeat 447 505 IPR001611 GO:0005515
Dod04g1909 1135 Pfam Leucine rich repeat 605 646 IPR001611 GO:0005515
Dod04g1909 1135 PRINTS Leucine-rich repeat signature 181 194 - -
Dod04g1909 1135 PRINTS Leucine-rich repeat signature 250 263 - -
Dod04g1909 1135 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Dod04g1909 1135 SUPERFAMILY Protein kinase-like (PK-like) 819 1120 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1909 Dod-Chr4 42152913 42156883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1909 45 1132 Receptor kinase-like Gene Family AT1G55610 49.469 0.0 1019
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dod04g1909 PK_Tyr_Ser-Thr 3.2e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1909 04 42152913 42156883 Dod04g1909 04 42152913 42156883 ECH