Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1858 ATGAACATGAACACGAACATGTTGGCTTCGTTCCCAAAATTTCCATTTGGAAGCGTCAGAGCAGACTTGGGAACCAAACCCAACTCAGACCATTCTTCTTTTCTCAAGCTCTCGCCCCACCCCTACCCTCTTGCTAGCAAAATTCTTGTTAAAAATTTACCATATTCTACTGGTGAGATTACTTTGCAGAAGGAATTTTCCAACTTTGGCAAGATAGCTGAAGTTAAAGTGGCTAAAGATTTGAAAACAAAAAGATCTAAGGGATATGCTTTTATTCAATATACATGTCAAGATGATGCCATGCTTGCACTAGAAACCATGGATCAGAAGGATTTTCACGGTCGGACAATTCATGTAGAAATTGCAAAACTGGGCTGGGATGATTATGGTAGACGTCCAAGGACCTCAGGGCCCCCAAAGAAATGGACTTTGCCAGATCAAGAGGAAGTGGTAGATTGCTGGTATTGA 468 0.4145 MNMNTNMLASFPKFPFGSVRADLGTKPNSDHSSFLKLSPHPYPLASKILVKNLPYSTGEITLQKEFSNFGKIAEVKVAKDLKTKRSKGYAFIQYTCQDDAMLALETMDQKDFHGRTIHVEIAKLGWDDYGRRPRTSGPPKKWTLPDQEEVVDCWY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1858 155 SUPERFAMILY RNA-binding domain, RBD 46 134 IPR035979 GO:0003676
Dod04g1858 155 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 27 149 - -
Dod04g1858 155 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 124 IPR000504 GO:0003723
Dod04g1858 155 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 118 IPR000504 GO:0003723
Dod04g1858 155 Gene3D - 28 143 IPR012677 -
Dod04g1858 155 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 27 149 - -
Dod04g1858 155 SMART rrm1_1 47 120 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1858 Dod-Chr4 41463139 41465748 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1858 04 41463139 41465748 Dod04g1858 04 41463139 41465748 ECH