Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1506 ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGACTAGATTGGAACCAAGCCTTATTGGAATCTCAAGACTTGGAACTTCCAAAGCCTCCTCATCTGATGAGGAAAAACCAGCAACAAAGTCAGCAATCAGAGCCTCTGAAGTGTCCAAGATGTGACTCCACAAACACCAAGTTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGTAAGAGGCACTGGACTAAAGGTGGAACACTACGCAGTGTTCCTGTTGGTGGTGGCAGGAAGAACAAAAGGGTCAAGAAATCAACCACCCAAACCTCTTCCACCATCACCACAGCCACCACCACCTCTACTTGCACCAATCCTCTCACCACCTCTATTGGCAAAATAGATGGTGGGATGAGTAGTAGCCACTTGGCAATTCAAACTCCTCTTTCAGTGAATGATCAGAAAAACATGACTTCATGTCTCTATCAAGGTCTGATTAAACCTCCATCTTTGCTGCTACAACAGAATCTGATGAGTACCAGAGGCATAGAGAGCAAAGATTTTGGTATTGGCGGTAATAATGGCATCTTTCTTGGTTCAACTTTTCCTCCTCCTCCTCCTCAAAGCCAAAGCCTACTCTTCCCCTTCTCAACAACCTCAAGCTCTTTGGACACAAACCCATGTTCAGTGTCAACCTCTTTGCAATCCTCCAATGTTTATAACTGTGGGGAAGAGTTTAGAACAATGGAGGAGCCAACAATCAACAGCACAATGCCAAGCACTAGTGGAACTAACACACAGCCATGGGAGATACCAGCAGCAACAAGTGGTGGCATGGAACTGTCAAACTATTGGAGTTGGGAGGACTTTGATTCGTTGGTCTCAACTGATCTAAACAATCCTTGGGATGATTCTGATCTCAAACCCTGA 924 0.4513 MGLSSKQVSSSGLDWNQALLESQDLELPKPPHLMRKNQQQSQQSEPLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRSVPVGGGRKNKRVKKSTTQTSSTITTATTTSTCTNPLTTSIGKIDGGMSSSHLAIQTPLSVNDQKNMTSCLYQGLIKPPSLLLQQNLMSTRGIESKDFGIGGNNGIFLGSTFPPPPPQSQSLLFPFSTTSSSLDTNPCSVSTSLQSSNVYNCGEEFRTMEEPTINSTMPSTSGTNTQPWEIPAATSGGMELSNYWSWEDFDSLVSTDLNNPWDDSDLKP* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1506 307 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Dod04g1506 307 PANTHER OS06G0284500 PROTEIN 30 215 - -
Dod04g1506 307 MobiDBLite consensus disorder prediction 26 48 - -
Dod04g1506 307 Pfam Dof domain, zinc finger 46 99 IPR003851 GO:0003677|GO:0006355
Dod04g1506 307 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 215 IPR045174 GO:0003700|GO:0006355
Dod04g1506 307 MobiDBLite consensus disorder prediction 88 111 - -
Dod04g1506 307 MobiDBLite consensus disorder prediction 34 48 - -
Dod04g1506 307 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1506 Dod-Chr4 36663943 36666210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1506 47 103 C2C2-Dof Transcription Factor Family AT1G28310 82.759 1.60e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod04g1506 zf-Dof 4.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1506 - - gmx:100818111 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1506 04 36663943 36666210 Dod03g0386 03 4790653 4791836 PCT