Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1453 ATGGATCAAGAAGGAGAAGATAGAGGAGGAGAGGAGAATAATAAGCAGCCTCAACCTCAGCCTCCTCAGCCTCATCCTCCACCACCACAACCGCAGCAGCACCAGAAATGTCCACGCTGCGATTCTCTGAACACAAAGTTCTGCTATTACAACAACTATAGCCTATCACAGCCCCGGTACTTCTGCAAATCATGCAAAAGGTACTGGACACAGGGGGGAACCATGAGGAACATACCAGTTGGCGGTTCCAGGAAAGGGAAGCGTGGCAACAGGAGTTCTTCTTCTTCTTCTTCTTCTTCCAGCCACAAACCTTACAGGTCGCAGCAGCCTCAACCATCAATATTACCGCATGAGGTGGTTCAAAACCAGCAGTCAAACTTGACAACGTTGGTAGGGCCTTCTCCATCCACCGTGGTTCCACCAACAAACAGTCCCTATGGTGGTGGGTATTTGTCTTCTCTGGCTGCTGTTCATTCACTTAACCCATCATCACAGTCACAGGCACTCAATCAGTCTTTGAGTTTCGGGTTCAACGCTTCTGACTCTCTTGGTTCAGAACACCACCAACATAGCCAGATTCTTCCATCAAGATTCTATCATATGGGTAAGGTAGGATCTAATTTGTATCCTGCATCACAACAAGGTTTGATTCCATCAAGCATGGGTAGTAGCAGTGCTGCTGCTTCTCACCTTGATCATGGGGCCTCTGATGCCTCTTTGTGGAGTACTATCAGCACTACTTCCATAAGTGGTAACTCCGATCAGAGCAATATCAGAGGTGGTTCTTCTTCTTTGACCCCAAATCTTCACTGGCCTCATCTGCCAGGGTATGGCGACCCTCCTGAATAA 849 0.4806 MDQEGEDRGGEENNKQPQPQPPQPHPPPPQPQQHQKCPRCDSLNTKFCYYNNYSLSQPRYFCKSCKRYWTQGGTMRNIPVGGSRKGKRGNRSSSSSSSSSSHKPYRSQQPQPSILPHEVVQNQQSNLTTLVGPSPSTVVPPTNSPYGGGYLSSLAAVHSLNPSSQSQALNQSLSFGFNASDSLGSEHHQHSQILPSRFYHMGKVGSNLYPASQQGLIPSSMGSSSAAASHLDHGASDASLWSTISTTSISGNSDQSNIRGGSSSLTPNLHWPHLPGYGDPPE* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1453 282 MobiDBLite consensus disorder prediction 87 111 - -
Dod04g1453 282 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Dod04g1453 282 MobiDBLite consensus disorder prediction 246 269 - -
Dod04g1453 282 MobiDBLite consensus disorder prediction 246 282 - -
Dod04g1453 282 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Dod04g1453 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 280 IPR045174 GO:0003700|GO:0006355
Dod04g1453 282 Pfam Dof domain, zinc finger 33 86 IPR003851 GO:0003677|GO:0006355
Dod04g1453 282 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 6 280 - -
Dod04g1453 282 MobiDBLite consensus disorder prediction 1 38 - -
Dod04g1453 282 MobiDBLite consensus disorder prediction 73 111 - -
Dod04g1453 282 MobiDBLite consensus disorder prediction 17 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1453 Dod-Chr4 36186005 36187752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1453 13 100 C2C2-Dof Transcription Factor Family AT5G60200 61.364 1.02e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod04g1453 zf-Dof 2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1453 - - ccaj:109801261 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1453 04 36186005 36187752 Dod03g0438 03 5359158 5360384 PCT