Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1452 ATGTTGAGCAACTGTGAGGAAATGCTTGTCATCTCTCCAACGACTAACGAATGGACACAGACTCAGATGCTAGAAGATCACAAGGTCTCAATGGCTTCCTCTGGTAGGGTTATGGAGAAACCGGGTCAAGAGCTTCTTCAACAGCAACATCAAGCGCTCAAGTGCCCTCGATGCGACTCATCAAACACCAAGTTCTGCTACTACAACAACTACAGCTTGTCGCAGCCAAGGCACTTCTGCAAAGCCTGCAAGCGATACTGGACAAGGGGGGGAACTCTTAGGAATGTTCCTGTAGGAGGCGGCTGCAGAAAAAACAAGCGCGTGAAGCGCCAAACCTCTTCTTCCATTGACACCACTGCTTCTCCTCCTTCTTCTTCCACTCCTAGCAGTTCCAATTCGAACCCTCCTTCCATGCCCCACATCGACAATATTGCTTCAACCTCAAATCATATCAACCCTTTGTTTTATGGGCTACCTACTAGTAACTCTTGTGAAGTCTTAAATCTTCCTTTCCCAGGGTTCAGTTCTAGAGTTTCGAGTTCTGGGTATGATCTTCAGCCTCATCTGAATGCCCTTGGTGGGTTAGGTTTTTCATCCGGGGTTATGTCAAGTGAAGCTAGTGATAATAGTGGTTACCGGAATGGTGGGTTTGGTTCAAATAACACGTTTCTCTCTGCTTACAATTCCATTTTTGGTTGTCCTTCTTCAAATTCTACACCCACCACTCCAGTTATGGCTTCCCTTTTGAGCTCAACTATACTGCAGCAAAGATTCGTCAATGTTGGAGTGAAGCATAGTGGTCTAGGTGGCAACAACTTCCAGGGCTTGGCTCCTTTGGAGGAGCTGCAAATGAGAGGGAATAGTGGTAGTGAGGAAGTTGCAGTGATGAGTTCAAAAGAAGTGAAAGGTGAAGGACAAGACAGGTTGGAGTGGATCGGTGGTGCTTGCCAGAACCAGATCGATCATGTGGGCATGTCTGATCCTTCGCTTTATTGGAACACTGCTGCAACAGCTTTGGGTGGTGCTTGGAGTGATCAGCCTAATATTGGTCCTTCAGTCACATCTCTGATCTAG 1074 0.4693 MLSNCEEMLVISPTTNEWTQTQMLEDHKVSMASSGRVMEKPGQELLQQQHQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRQTSSSIDTTASPPSSSTPSSSNSNPPSMPHIDNIASTSNHINPLFYGLPTSNSCEVLNLPFPGFSSRVSSSGYDLQPHLNALGGLGFSSGVMSSEASDNSGYRNGGFGSNNTFLSAYNSIFGCPSSNSTPTTPVMASLLSSTILQQRFVNVGVKHSGLGGNNFQGLAPLEELQMRGNSGSEEVAVMSSKEVKGEGQDRLEWIGGACQNQIDHVGMSDPSLYWNTAATALGGAWSDQPNIGPSVTSLI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1452 357 ProSiteProfiles Zinc finger Dof-type profile. 53 107 IPR003851 GO:0003677|GO:0006355
Dod04g1452 357 MobiDBLite consensus disorder prediction 112 144 - -
Dod04g1452 357 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 341 IPR045174 GO:0003700|GO:0006355
Dod04g1452 357 MobiDBLite consensus disorder prediction 98 144 - -
Dod04g1452 357 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 2 341 - -
Dod04g1452 357 ProSitePatterns Zinc finger Dof-type signature. 55 91 IPR003851 GO:0003677|GO:0006355
Dod04g1452 357 Pfam Dof domain, zinc finger 51 107 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1452 Dod-Chr4 36160402 36162969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1452 53 357 C2C2-Dof Transcription Factor Family AT1G28310 42.271 7.25e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod04g1452 zf-Dof 2.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1452 - - ccaj:109814566 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1452 04 36160402 36162969 Dod04g1452 04 36160402 36162969 ECH
Dod04g1452 04 36160402 36162969 Dod03g0440 03 5373427 5376928 PCT