Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1150 ATGGCTGGAACAGCTGAACACCTCCCAATCTATGAGCCTGGCCTTGATGATGTGGTGAAGCAGTGCAGGGGGAAGAACCTCTTCTTCAGCACAGATGTGGAGCGGCATGTTTCTGAGGCTGATATAGTCTTTGTATCTGTCAATACCCCAACAAAGACTCAGGGTCTTGGAGCTGGCAAAGCAGCTGATCTAACATACTGGGAGAGTGCTGCTAGGTTGATTGCTGATGTATCAAAATCAGACAAGATTGTGGTTGAGAAATCAACTGTTCCAGTGAAAACTGCTGAGGCAATTGAGAGGATCCTGACACATAATGGGAAAGGCATCAATTTCACAATTCTCTCAAACCCGGAATTTCTTGCTGAGGGAACTGCAATTCAGGACCTCTTCCATCCTGATAGAGTCCTTATAGGTGGCAGGGAGACCCCAGAAGGCCAAAAGGCTATGAACACACTGAAAGATGTTTATGCTAATTGGGTTCCTGAGGAGAGAATCCTCTGCACAAACTTGTGGTCCGCTGAGCTCTCAAAGCTTGCTGCCAATGCTTTCCTTGCACAGAGAATCTCTTCTGTGAATGCAATGTCAGCACTGTGTGAGGCAACTGGGGCTGATGTCTCCCAGGTGTCACACTCAATTGGCACCGACTCGAGGATTGGACCAAAGTTCTTGAATGCCAGTGTTGGCTTTGGTGGATCCTGCTTCCAGAAGGACATATTGAACTTGGTCTATATCTGTGAGTGCAATGGCCTTCCTGAGGTAGCAAATTACTGGAAGCAGGTCATCAAGGTGAATGACTACCAGAAGAATCGGTTTGTGAACCGAGTGGTTTCGTCGATGTTCAACACGGTTTCAACCAAGAAGATTGCTGTTCTGGGCTTTGCATTCAAGAAGGACACTGGTGACACTAGGGAAACACCAGCTATTGATGTGTGCAAGGGGCTTTTGGGGGACAAAGCTAAGTTGAGCATATATGATCCTCAGGTTACTGAAGATCAGATACTGAAGGATCTTTCTATGAGGAAGTTTGATAAGGACCACCCTTCTCATCTCCAGCCACCAAGCCCCACTTCCATAAAGCAAGTGTCTGTGGTTTGGGATGCCTATGAGGCAGTGAAGGATTCACATGGTGTGTGCATTCTGACTGAGTGGGATGAGTTCAGGAAGCTTGATTACCAAAGAGTCTTTGACAGCATGCAGAAACCAGCATTTTTGTTTGATGGCAGGAACATTGTTGATGCCAACAAGCTGAGGGAAATTGGGTTAATTGTTTATTCCATTGGCAAGCCACTAGATCCATGGCTTAAGGACATGCCTGCAGTGGCATAA 1326 0.4661 MAGTAEHLPIYEPGLDDVVKQCRGKNLFFSTDVERHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARLIADVSKSDKIVVEKSTVPVKTAEAIERILTHNGKGINFTILSNPEFLAEGTAIQDLFHPDRVLIGGRETPEGQKAMNTLKDVYANWVPEERILCTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHSIGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKNRFVNRVVSSMFNTVSTKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQILKDLSMRKFDKDHPSHLQPPSPTSIKQVSVVWDAYEAVKDSHGVCILTEWDEFRKLDYQRVFDSMQKPAFLFDGRNIVDANKLREIGLIVYSIGKPLDPWLKDMPAVA* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1150 441 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 276 424 IPR036220 -
Dod04g1150 441 Gene3D - 170 201 - -
Dod04g1150 441 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 147 IPR001732 GO:0016616|GO:0051287
Dod04g1150 441 Gene3D - 202 438 - -
Dod04g1150 441 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 7 409 IPR017476 GO:0016616
Dod04g1150 441 Gene3D - 2 169 - -
Dod04g1150 441 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 171 270 IPR008927 -
Dod04g1150 441 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 4 441 - -
Dod04g1150 441 SMART UDPG_MGDP_dh_C_a_2_a 289 413 IPR014027 GO:0016616|GO:0051287
Dod04g1150 441 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 289 412 IPR014027 GO:0016616|GO:0051287
Dod04g1150 441 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 162 IPR036291 -
Dod04g1150 441 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 171 265 IPR014026 GO:0016616|GO:0051287
Dod04g1150 441 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 4 441 IPR028356 GO:0003979
Dod04g1150 441 PIRSF UDPglc_GDPman_dh 3 428 IPR017476 GO:0016616
Dod04g1150 441 PIRSF UDPglc_DH_euk 2 441 IPR028356 GO:0003979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1150 Dod-Chr4 32134632 32137327 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1150 04 32134632 32137327 Dod04g1150 04 32134632 32137327 ECH
Dod04g1150 04 32134632 32137327 Dod02g1728 02 21701704 21704348 PCT