Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1146 ATGGAACACTGCCACGAGCCTCCACCACCGGATCCTGCAACTGCAACTGCCACTCATCTGTACCCGAGCTCCACACTCGGACCTGATGAACAATCCGACGCTCTCTATTTCTTCTCCGGCGGTATTCACAGCAACATGCTCTCCGACTTCGCCTGGATCCGCGAAGGGGAAGGCGGCTTGCGGCTGCCAGAGAACAATATCAATCAATCGCTTTCTTCAAGCTCCGGCGGCGGCCAGGATCCGCCGGAGATTTCCATCGCCTCTGGCGGGAAAAAGCACCAGACACCGAATAAAAGTAAGAAGAAGCAAAAGCGAATGAAGCAGCCAAGGTTCGCTTTTATGACCAAGAGCGAAACTGATAATCTTGAAGATGGCTACAGATGGCGGAAATATGGCCAGAAGGCAGTTAAAAATAGTCCGTTTCCCAGGAGCTATTATCGTTGCACAAACAGCAAATGCACCGTGAAGAAAAGGGTGGAACGCTCCTCCGCGGACCCAAGTGTTGTTATTACAACATATGAAGGGCAACACTGTCATCACACCGTTGGGATATTCCACCGAGGTGGCATGATTAGTCATGAATTCGCCACATTTCGCAGTCAGTACTGTTACTCCCCTAGAATGTCACAGTTCAATTATCCAATCCAATTACCCGGAGAAAACACTCTTAGCAGTGTTTCTCATGATCTGCCTTGCCAAGCACGTGATAATATTGAAGCAGCTGGAAGATGCAGCGCTGATGTGTTGCCAGAATATTCATCCCTACAGCCTCTCATGGATGATGGACTACTCGGAGACATAGTGGCCCGGGAAATATATAATGGTACATCCAACTTCACATGA 843 0.4923 MEHCHEPPPPDPATATATHLYPSSTLGPDEQSDALYFFSGGIHSNMLSDFAWIREGEGGLRLPENNINQSLSSSSGGGQDPPEISIASGGKKHQTPNKSKKKQKRMKQPRFAFMTKSETDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSADPSVVITTYEGQHCHHTVGIFHRGGMISHEFATFRSQYCYSPRMSQFNYPIQLPGENTLSSVSHDLPCQARDNIEAAGRCSADVLPEYSSLQPLMDDGLLGDIVAREIYNGTSNFT* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1146 280 Gene3D WRKY domain 109 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g1146 280 PANTHER OS03G0758000 PROTEIN 70 187 - -
Dod04g1146 280 MobiDBLite consensus disorder prediction 94 109 - -
Dod04g1146 280 MobiDBLite consensus disorder prediction 64 81 - -
Dod04g1146 280 ProSiteProfiles WRKY domain profile. 117 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1146 280 SMART WRKY_cls 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1146 280 MobiDBLite consensus disorder prediction 1 26 - -
Dod04g1146 280 Pfam WRKY DNA -binding domain 123 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1146 280 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 70 187 IPR044810 GO:0003700
Dod04g1146 280 SUPERFAMILY WRKY DNA-binding domain 114 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g1146 280 MobiDBLite consensus disorder prediction 64 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1146 Dod-Chr4 32075650 32080782 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod04g1146 WRKY 2.5e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1146 04 32075650 32080782 Dod04g1146 04 32075650 32080782 ECH