Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1144 ATGGCTGCTCTACCCTTCTCAACTACCTGCAGGCGTTCCAACCCACCTTTACACCCCAATTCCAAGTCAAGCTTCACCGGTTTCAGCCAAAGAGAGAATATTTGCCACTTGTTTGTCATCAGAAAGTCCAGTTCCAGAAGGGCAATAAGGAAGCTCTGCGTGAAGAATATTGCCAGTGATAAAAAGCAGGAACTGAATGAACCACTCACTGAACAAGGAACTTTAGATAAATTTGTTCCAGATTCTGCATCTATTGCTGCAAGCATCAAGTACCATGCTGAGTTCACCCCATCTTTGTCTCCAGAGAAATTTGAGCTCAGCAAGGCTTTCTATGCAACTGCGGAGAGTGTTCGCGATTCCCTCATTATAAATTGGAATGCAACATATGAACATTATGAGAGGATGAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGGTAGGGCATTGCTAAATGCAATTGGAAATTTACAACTCTCGGGCCCTTATGCTGAGGCTCTCAGAAAGCTGGGTCACAATTTAGAGGATGTGGCTAATAAGGAGCCAGATGCTGCCCTTGGGAATGGGGGATTAGGCCGGCTTGCTTCTTGCTTTTTAGACTCCTTAGCAACTCTTAATTACCCTGCATGGGGATATGGGCTTAGATACAAGTATGGTTTATTCAAACAACTTATAACAAAGGACGGTCAAGAAGAAGTTGCTGAAAACTGGCTTGAGATGGGAAATCCCTGGGAAATTCCGAGAAAAGATGTCTCTTATCCAGTTAGATTCTATGGGGAAGTTATCTCAGGGCCAGATGGAAGTAAACGGTGGATTGGAGGAGAAAATATATTGGCTGTTGCTTATGATATTCCAATACCAGGATATAAAACTAGAACCACTATTAACCTGCGTTTGTGGTCCACTAAAGTTTTACCTGAAGATTTTGATTTGCGAGCTTTCAATGCTGGAGATCATGACAAAGCATATGCTGCTATGAAAAATGCAGTAAAGATCTGCTACGTATTGTACCCTGGGGATGAATCAATTGAAGGAAAGACTTTACGATTGAAGCAGCAATATACCTTGTGCTCTGCCTCCCTCCAGGATATTATTGCACACTTTGAAAAGAGATCAGGGAAAACCATAAACTGGGACACCTTCCCAGAAAAAGTGGTGGTTCAAATGAATGATACTCACCCAACACTCTGCATTCCAGAACTGATCAGGATATTGATGGATGTAAAGGGTTTAAGCTGGGAGAAAGCCTGGGATATTACTAAAAGGTGCTTCCCTTTGCATCATCTGTCTATTCAGTTTATTACTAAAAGATATAATAATAAACTTTTAGTACAGCAGTTCTTTAAAACTTATGGTTTCAATCCCTTCCATCAATTCCACACGAGTACGGTTGCTTACACAAACCACACAGTTCTACCAGAGGCACTAGAGAAATGGAGTTTGAAACTTCTGCAGGATTTGCTTCCTCGGCATGTAGAGATAATAACAACAATAGATGAAGAGTTGACACATGAAATTATTTCCGAGTACGGGACCAATGATCTTGACTTGTTGGAACAAAAGCTGAGAAAGATGAGAATACTAGAAAATATTGAGTTGCCTAACTCAGTGGTAGAGCTGATTAATAACTCAAGAGAGATTCCTGCCACTGACCCTATGGTGGAAATTGATGTTAATGACACTGATATAAAGGCATCAGAAGAAGAAGAAGAAGAAAAAGAAGAGGATGATGATGATGATGATGAAGTAGCAGAAAAGGAACAAGAAGATGGTGATGATGATGATGATGATGAAGACCCATCTGCTGAGGAGGACACTGAAAGGGAAACAGAGTGGACATTCAAAGTTGATCCAAAACAGCCATCAATGGTTCGCATGGCTAATCTATGTGTTGTTGGTGGATTTTCTGTGAATGGAGTAGCTGAGATTCACAGTGAGATTGTGAAAGATGAAGTTTTTAATGACTTTTACGAGTTGTGGCCTGAGAAATTCCAGAACAAAACAAATGGGGTGACCCCTAGAAGATGGATCCGTTTTTGTAATCCTGATCTTAGTAAAATCATAACCAAGTGGATTGGAACAGAAGAGTGGGTAACAGATCTTGAGAAATTGGCTATACTTCGCAAGTTTGCAGATAATGAGGATCTACAATCAGAATGGATGGAATCAAAGAGAAGAAACAAGATTAAGGTTGCGTCATTTATCAAAGAAAGAACTGGTTATGAAGTCAGCCCAAATGCGATGTTTGATGTACAGGTGAAGCGCATTCATGAATACAAACGGCAGTTACTGAATATCATGGGAATTGTTTATCGCTACAAAAAGATGAAGGAAATGAGTGCTGAGGAAAGAAAGCAAGGGTTTGTTCCTCGGGTTTGTATTTTTGGTGGGAAAGCATTTGCAACATATGTTCAAGCCAAGAGGATTGTAAAATTCATCACAGACGTAGGAGCTACTGTCAATCATGATCCAGAGATTGGAGATCTTTTGAAGGTTGTATTTGTTCCTGACTACAATGTCAGTGTCGCTGAAATGCTAATTCCTGGCAGTGAGTTGTCCCAGCACATCAGCACGGCTGGCATGGAAGCCAGTGGAACAAGCAACATGAAATTTGCTATGAATGGATGTATACTTATTGGAACTCTTGATGGGGCTAATGTTGAAATAAGAGAAGAGGTTGGAGAAGATAACTTCTTTCTGTTTGGTGCACGAGCTCACGAGATTGCTGGGCTACGGAAAGAAAGAGCCGAGGGAAAGTTTGTGCCGGACCCACGATTTGAAGAAGTTAAGGCATATGTAACAAGTGGTGTTTTTGGCCCCTACAACTATGAAGAATTGATGGGATCCTTGGAAGGGAATGAAGGCTATGGTCGTGCTGATTATTTCCTTGTTGGAAAGGACTTCCCTAGCTACTTGGAGTGCCAAGAGGCAGTTGACAATGCATATAGAGATCAAAAGAGATGGACAAGAATGTCAATCTTGAACACAGCCGGTTCATGCAAATTCAGCAGTGACCGGACCATTCATGAATATGCTAGAGACATATGGAGAATTGAACCTATTGAATTGGTTTGA 3084 0.4102 MAALPFSTTCRRSNPPLHPNSKSSFTGFSQRENICHLFVIRKSSSRRAIRKLCVKNIASDKKQELNEPLTEQGTLDKFVPDSASIAASIKYHAEFTPSLSPEKFELSKAFYATAESVRDSLIINWNATYEHYERMNVKQAYYMSMEYLQGRALLNAIGNLQLSGPYAEALRKLGHNLEDVANKEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAENWLEMGNPWEIPRKDVSYPVRFYGEVISGPDGSKRWIGGENILAVAYDIPIPGYKTRTTINLRLWSTKVLPEDFDLRAFNAGDHDKAYAAMKNAVKICYVLYPGDESIEGKTLRLKQQYTLCSASLQDIIAHFEKRSGKTINWDTFPEKVVVQMNDTHPTLCIPELIRILMDVKGLSWEKAWDITKRCFPLHHLSIQFITKRYNNKLLVQQFFKTYGFNPFHQFHTSTVAYTNHTVLPEALEKWSLKLLQDLLPRHVEIITTIDEELTHEIISEYGTNDLDLLEQKLRKMRILENIELPNSVVELINNSREIPATDPMVEIDVNDTDIKASEEEEEEKEEDDDDDDEVAEKEQEDGDDDDDDEDPSAEEDTERETEWTFKVDPKQPSMVRMANLCVVGGFSVNGVAEIHSEIVKDEVFNDFYELWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWIGTEEWVTDLEKLAILRKFADNEDLQSEWMESKRRNKIKVASFIKERTGYEVSPNAMFDVQVKRIHEYKRQLLNIMGIVYRYKKMKEMSAEERKQGFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVVFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIREEVGEDNFFLFGARAHEIAGLRKERAEGKFVPDPRFEEVKAYVTSGVFGPYNYEELMGSLEGNEGYGRADYFLVGKDFPSYLECQEAVDNAYRDQKRWTRMSILNTAGSCKFSSDRTIHEYARDIWRIEPIELV* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1144 1027 PIRSF Glucan_phosphorylase_GlgP 82 429 IPR000811 GO:0005975|GO:0008184
Dod04g1144 1027 PIRSF Glucan_phosphorylase_GlgP 445 530 IPR000811 GO:0005975|GO:0008184
Dod04g1144 1027 PIRSF Glucan_phosphorylase_GlgP 576 1027 IPR000811 GO:0005975|GO:0008184
Dod04g1144 1027 MobiDBLite consensus disorder prediction 565 609 - -
Dod04g1144 1027 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 865 877 IPR035090 -
Dod04g1144 1027 Gene3D Glycogen Phosphorylase B; 79 548 - -
Dod04g1144 1027 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 427 - -
Dod04g1144 1027 Gene3D Glycogen Phosphorylase B; 674 1006 - -
Dod04g1144 1027 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 619 1025 - -
Dod04g1144 1027 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 461 1026 - -
Dod04g1144 1027 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 26 426 - -
Dod04g1144 1027 MobiDBLite consensus disorder prediction 1 24 - -
Dod04g1144 1027 MobiDBLite consensus disorder prediction 554 620 - -
Dod04g1144 1027 CDD GT35_Glycogen_Phosphorylase 88 1021 - -
Dod04g1144 1027 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 618 1021 IPR011833 GO:0004645|GO:0005975|GO:0030170
Dod04g1144 1027 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 456 517 - -
Dod04g1144 1027 Pfam Carbohydrate phosphorylase 618 1021 IPR000811 GO:0005975|GO:0008184
Dod04g1144 1027 Pfam Carbohydrate phosphorylase 455 533 IPR000811 GO:0005975|GO:0008184
Dod04g1144 1027 Pfam Carbohydrate phosphorylase 170 427 IPR000811 GO:0005975|GO:0008184
Dod04g1144 1027 Gene3D Glycogen Phosphorylase B; 617 1019 - -
Dod04g1144 1027 MobiDBLite consensus disorder prediction 7 24 - -
Dod04g1144 1027 PANTHER GLYCOGEN PHOSPHORYLASE 461 1026 IPR000811 GO:0005975|GO:0008184
Dod04g1144 1027 PANTHER GLYCOGEN PHOSPHORYLASE 26 426 IPR000811 GO:0005975|GO:0008184
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1144 Dod-Chr4 32043601 32051527 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1144 04 32043601 32051527 Dod04g1144 04 32043601 32051527 ECH