Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1137 ATGTTCGTCGTTTTGGGTTTCCTCCGTCGTCGTACACCGAACCCTCGCCTTCAATGGAGGTCGCTCCACAACCACTCGCCGCCGTCGTTTCCGCCGCCGTCACTTCCTCCCACATTCTACCTCGCTCTCATGTGCCGAAACGCCGAAACCCTCAAGAAGCTTCACGCCTCGCTCATAGTTCACGGCCTCGCCGGCGCTGCCGCTGGAGACCACCTCCTCACCGCCACGAAGCTGCTGAGCATGTACGGCTCCTTCGGACTGGTCGGCTACGCCCGCCGCCTCTTCGACCAGCTCCGTTCCCCGGACTCCTACTCCTTCAAGGTCATGATCCGCTGGTACTTCCTAAACGACATGCACAACGACGTCGTTCGCCTCTACGACCTTGCTAGGTTAACCCTCGGCGCCTTCGACGACGACGTCGTTTTCTCCGTCGCCCTCAAGGCATGCTGCTCCCTGCGCGACGACGTTTCGGGGACAAGGATCCACTGCCACGTCATCAAGGCCAGGCATAACGCCCCCGACAGCTTCGTCCTGACGTGCCTCGTCGACGTTTACTCGAAGTGCGGGCGCGTGGAGAGCGCGCGCCACGTGTTCGACGAAATCACCGAACGGAACGTCGTTTCTTGGACCTCGATGATCGTCGCTTACGTGCAAAACGACTGTGCCCAAGAAGGGTTAACTCTGTTTAATAGAATGAGGGAAGGTTTTGTTTCTGGGAATGAGTTTACCGTCGGGAGCTTGGTGAATGCTTGCACAAAGTTGGGGTCTTTGCATCAGGGGAAGTGGGTTCATGGGTATGTGATTAAGAATGGGATTGAGGTTAATTCGTTCTTGGCAACTTCCCTTTTGGATATGTATGTTAAGTGTGGGGATTTGAGGGATGCTAAGAGAGTCTTTGATGAGGTTGAAGCTGTTGATGTTGTTTCTTGGACGGCTATGATTGTTGGGTATGCTCAGAGAGGTCACCCAAACACGGCCTTGGAGTTGTTCATTGGCAAGAGATGGGAAGGGTTGTTGCCGAATTCTGTTACCCTTTCGAGTTTGCTCTCTGCGTGTGCTCAGCTTGGGGATCATGCCCTTCTTGTTATCGGAAGGTCACTTCATGTTCTTGTGGTTAAGCTTGGATTTGATGATGATTGCGCTGTGAGGAATGCTCTTGTTGATATGTATGCAAAGTGCGGCGCAGTTTTTGATGCTCGTTGTGTGTTTGAGACCACAGTTGATAAGGATGTTGTGTCTTGGAACTCAGTTATTTCTGGTTGTGTTCAGTGTGGCTGTGCTTATGAAGCTCTTGAGCTGTTTGGAAGGATGAGGTTGGAGTCCTTTTCACCTGATGCGGTTACAATTGTTGGTGTTCTGTCGGCTTGTGCTTCCCTTGGTGCTCTTCAATTTGGTTCTTCCATTCACGCTTTCTCCTTGAAGGGTGGCCTTGTGTCCTCTAGCATCTATGTCGGCACTGCACTCCTCAATTTTTATGCAAAATGTGGGGATGCAAGATCTGCGCGCGTGGTGTTTGATGGCATGGAAGAGAAGAATGCCGTGACATGGGGCGCGATGATCGGTGGGTACGGCATGCAAGGCGATGGCAGTGGATCTCTTGCACTCTTTAGGGACATGTTGAGAGAAGAATTTGAGCCTAATGACGTGTTGTTCACAACTATATTATCAGCTTGCAGCCATTCAGGGATGGTTGGAGAAGGGTCCAGGTTGTTTGATATGATGTGTAGGGAACTGAATTTCAGTCCTTCCATGAAGCACTATGCGTGTATGGTTGATCTGTTGGCACGTGCCAGCAACCTTGAAGAAGCTTTGGACTTCATTGACAAGATGCCTGTTCAACCTAGCATTAGTGTGTTTGGAGCTTTTCTCCATGGGTGTGGACTTCATTCAAGGTTTGAGTTAGGAGAAGCTGCAATCAGGAGAATGCTGGAATTGCATCCTGATGAAGCTTGTTACTACGTGCTTGTGTCAAATCTATATGCTTCAGATGGAAGATGGGGCCTGGTTAAGCAGGTAAGAGAGATGATAAAGCAAAGAGGATTGAACAAGGTCCCTGGTTGCAGTTCAATGGAGATGGATGTTAACAGTGATATATATGCTAAAGTGGCAGCTGTTCCTTAA 2121 0.504 MFVVLGFLRRRTPNPRLQWRSLHNHSPPSFPPPSLPPTFYLALMCRNAETLKKLHASLIVHGLAGAAAGDHLLTATKLLSMYGSFGLVGYARRLFDQLRSPDSYSFKVMIRWYFLNDMHNDVVRLYDLARLTLGAFDDDVVFSVALKACCSLRDDVSGTRIHCHVIKARHNAPDSFVLTCLVDVYSKCGRVESARHVFDEITERNVVSWTSMIVAYVQNDCAQEGLTLFNRMREGFVSGNEFTVGSLVNACTKLGSLHQGKWVHGYVIKNGIEVNSFLATSLLDMYVKCGDLRDAKRVFDEVEAVDVVSWTAMIVGYAQRGHPNTALELFIGKRWEGLLPNSVTLSSLLSACAQLGDHALLVIGRSLHVLVVKLGFDDDCAVRNALVDMYAKCGAVFDARCVFETTVDKDVVSWNSVISGCVQCGCAYEALELFGRMRLESFSPDAVTIVGVLSACASLGALQFGSSIHAFSLKGGLVSSSIYVGTALLNFYAKCGDARSARVVFDGMEEKNAVTWGAMIGGYGMQGDGSGSLALFRDMLREEFEPNDVLFTTILSACSHSGMVGEGSRLFDMMCRELNFSPSMKHYACMVDLLARASNLEEALDFIDKMPVQPSISVFGAFLHGCGLHSRFELGEAAIRRMLELHPDEACYYVLVSNLYASDGRWGLVKQVREMIKQRGLNKVPGCSSMEMDVNSDIYAKVAAVP* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1137 706 PANTHER OS07G0578800 PROTEIN-RELATED 56 702 IPR045215 GO:0003723|GO:0009451
Dod04g1137 706 Gene3D Tetratricopeptide repeat domain 160 257 IPR011990 GO:0005515
Dod04g1137 706 Gene3D Tetratricopeptide repeat domain 70 157 IPR011990 GO:0005515
Dod04g1137 706 Gene3D Tetratricopeptide repeat domain 366 467 IPR011990 GO:0005515
Dod04g1137 706 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 306 340 IPR002885 -
Dod04g1137 706 Pfam PPR repeat family 409 457 IPR002885 -
Dod04g1137 706 Pfam PPR repeat family 306 353 IPR002885 -
Dod04g1137 706 Gene3D Tetratricopeptide repeat domain 486 696 IPR011990 GO:0005515
Dod04g1137 706 Gene3D Tetratricopeptide repeat domain 258 365 IPR011990 GO:0005515
Dod04g1137 706 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 512 546 IPR002885 -
Dod04g1137 706 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 410 444 IPR002885 -
Dod04g1137 706 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL 56 702 - -
Dod04g1137 706 TIGRFAM PPR: pentatricopeptide repeat domain 207 234 IPR002885 -
Dod04g1137 706 TIGRFAM PPR: pentatricopeptide repeat domain 412 446 IPR002885 -
Dod04g1137 706 TIGRFAM PPR: pentatricopeptide repeat domain 178 206 IPR002885 -
Dod04g1137 706 TIGRFAM PPR: pentatricopeptide repeat domain 549 583 IPR002885 -
Dod04g1137 706 TIGRFAM PPR: pentatricopeptide repeat domain 514 547 IPR002885 -
Dod04g1137 706 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 174 208 IPR002885 -
Dod04g1137 706 Pfam E motif 629 691 IPR046848 -
Dod04g1137 706 Pfam PPR repeat 549 576 IPR002885 -
Dod04g1137 706 Pfam PPR repeat 280 302 IPR002885 -
Dod04g1137 706 Pfam PPR repeat 514 542 IPR002885 -
Dod04g1137 706 Pfam PPR repeat 587 610 IPR002885 -
Dod04g1137 706 Pfam PPR repeat 486 512 IPR002885 -
Dod04g1137 706 Pfam PPR repeat 207 234 IPR002885 -
Dod04g1137 706 Pfam PPR repeat 178 206 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1137 Dod-Chr4 32003936 32006603 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1137 04 32003936 32006603 Dod04g1137 04 32003936 32006603 ECH