Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0231 ATGGAGAACATGATGGGTCTGCTGAGAATTCATGTTCAGAAAGGGATCAATCTTGCTATCAGGGATGTTAATAGTAGTGACCCTTATGTCATCATCAAAATGGGCAAGCAGAAGCTGAAGACTCGGGTAGTGCGGAGGAATGTCAATCCTGAATGGGATGATGATTTGACTCTGTCCATCTCAGATCTTCATCTTCCAGTCCAGCTATCTGTGTATGATAAGGACACATTTAGCTTTGATGACAGAATGGGGGATGCTGAGTTTGACATTGGTCCATTTATTGAAGCAGTGAAGATGCGCTTGGAAGGTCTCCCTAATGACACTATAGTCACAAGGATTCAGCCTAGCAGACAAAACTGCTTGGCAGAAGAGAGCCAAATTGTGTGGAAAGATGGCAAAGTGGTGCAAAACATGGTTCTTAGGCTAAGAAATGTGGAGTGTGGGGAAGTGGAGCTGCAGCTGCATTGGATTGACATTCCTGGATCAAGGGGTCTCTAA 498 0.4458 MENMMGLLRIHVQKGINLAIRDVNSSDPYVIIKMGKQKLKTRVVRRNVNPEWDDDLTLSISDLHLPVQLSVYDKDTFSFDDRMGDAEFDIGPFIEAVKMRLEGLPNDTIVTRIQPSRQNCLAEESQIVWKDGKVVQNMVLRLRNVECGEVELQLHWIDIPGSRGL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0231 165 Pfam C2 domain 6 92 IPR000008 -
Dod04g0231 165 Gene3D C2 domain 2 163 IPR035892 -
Dod04g0231 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Dod04g0231 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
Dod04g0231 165 SMART C2_3c 7 102 IPR000008 -
Dod04g0231 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Dod04g0231 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Dod04g0231 165 CDD C2_ArfGAP 6 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0231 Dod-Chr4 2871061 2873380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0231 38 165 C2H2 Transcription Factor Family AT1G70790 59.231 1.61e-53 165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0231 04 2871061 2873380 Dod04g0231 04 2871061 2873380 ECH