Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0227 ATGAAGAGGGATCACAGAGAAGCTAGCTCCACCACCTACGGCCAGCAAGGTGCCTGCAGCAGCGCCTCCTCCGCGGCGGCGAAAGGAGAATGCTCGTCAATCTCAAGCGGGAAGGAGAAGATGTGGGAGGAGGAGCACGACCCTACCGGCGGCATGGACGAGCTCCTCGCGGCTTTGGGATACAAGGTTCGCAACTCCGACATGGCTGACGTGGCTCAGAAGCTGGAGCAGCTGGAGATGGTGATGGGAACCGCACAAGAAGACGGAATTTCGCACCTCGCCACCGACACCGTTCACTACGACCCAACGGATCTCTATTCCTGGGTCCAGAGCATGCTCACTGAGCTCAACCCTCCCCCAACCACCACACCAACCACCGCATCGGACCCATCGTCACTCTTGTGCAACCCACAAATGGACGACGCCATCGAAGAAAATCCCTCACGCGCCTTCACTGACGACTCAGAGTACGACCTCAGAGCCATCCCCGGCATCGCCGCGTACCCTCCAAACGAAGAACCAAACACGAAGCGTCTCAAAACGACGCCGCTTCAGCAAATCGGGTCGGACCCGGTTCAAGAACCGACCCGTCCAGTTGTCCTCGTGGATTCCCAGGAAACAGGGGTCCGCCTCGTGCACACTCTCCTCGCCTGCGCGGAGGCCGTTCAAGCAGAAAATCTCAAGCTCGCGGACGCGCTGGTGAAGCACGTGGAGCTACTCGCGGCGTCCCAGGCCGGAGCAATGAGGAAGGTGGCATTATACTTCGCACAAGCACTCGCGAGCAGGATTTACCAAATATACCCTCAGGAGGCCCTCGATTCGTCTTTCTCGGACTTGCTCCACATGCACTTCTACGAGTCCTGCCCTTACCTCAAATTCGCGCACTTCACCGCAAATCAGGCCATTCTTGAGGCCTTCGCGTCCGCCACCAGTGTCCACGTCATCGACTTTGGGCTCAAGCAAGGGATGCAGTGGCCCGCACTCATGCAGGCCCTCGCATTGCGGCCCGGAGGCCCACCAACCTTCCGCTTAACTGGAATCGGGCCCCCACAGCCCGACAACACCGACGCGCTCCAACAGGTGGGCTGGAAGCTCGCGCAGCTAGCACAAACAATCGGCGTCCAGTTCCAGTTCCGCGGCTTTGTCTGTTCCAGCTTGTCGGATCTCGACCCGAACATGCTCGAGATCCGACCCGGTGAGGCCGTCGCGGTTAATTCCGTTTTCGAATTGCATCGCTTGCTGGCCCGGCCCGGGTCCATCGAGAAGGTTTTGGGGACGGTTAAGAAAATCAAGCCCAAGATCTTTACGGTTGTGGAGCAGGAAGCGAACCATAACGGTCCGGTTTTTCTGGACCGGTTCACGGAGGCCTTGCATTACTACTCCAGCTTGTTTGACTCGCTGGAGGGCTCGGCGGCGACCGGGTTGGCTACCCCTAGTGAGGAGCTTTTGATGTCGGGGCTTTACCTTGGGAGGCAGATTTGCAACGTGGTGGCGTGCGAGGGGCCGGACCGGGTCGAGAGACACGAGACTTTGGCTCAGTGGCGGGCCAGGATGGGCTCGGCCGGGTTTGACCCGGTTCACCTTGGTTCCAACGCGTTCAAGCAAGCGAGCATGTTGTTGGCGCTTTTCGCTGGTGGGGATGGGTATAGGGTGGAGGAGAACAATGGGTGCTTGATGCTTGGGTGGCACACCAGGTCGCTCATTGCAACCTCCGCCTGGAAGCTTCCAGCGCCTTCTGGCGGCGAGTCGTAG 1752 0.5942 MKRDHREASSTTYGQQGACSSASSAAAKGECSSISSGKEKMWEEEHDPTGGMDELLAALGYKVRNSDMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYDPTDLYSWVQSMLTELNPPPTTTPTTASDPSSLLCNPQMDDAIEENPSRAFTDDSEYDLRAIPGIAAYPPNEEPNTKRLKTTPLQQIGSDPVQEPTRPVVLVDSQETGVRLVHTLLACAEAVQAENLKLADALVKHVELLAASQAGAMRKVALYFAQALASRIYQIYPQEALDSSFSDLLHMHFYESCPYLKFAHFTANQAILEAFASATSVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVQFQFRGFVCSSLSDLDPNMLEIRPGEAVAVNSVFELHRLLARPGSIEKVLGTVKKIKPKIFTVVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGSAATGLATPSEELLMSGLYLGRQICNVVACEGPDRVERHETLAQWRARMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRSLIATSAWKLPAPSGGES* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0227 583 Pfam GRAS domain family 211 574 IPR005202 -
Dod04g0227 583 PANTHER DELLA PROTEIN RGL1 47 574 IPR030006 GO:0003712|GO:0005634
Dod04g0227 583 ProSiteProfiles GRAS family profile. 202 574 IPR005202 -
Dod04g0227 583 MobiDBLite consensus disorder prediction 10 31 - -
Dod04g0227 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 47 574 IPR005202 -
Dod04g0227 583 Coils Coil 68 88 - -
Dod04g0227 583 MobiDBLite consensus disorder prediction 1 48 - -
Dod04g0227 583 Pfam Transcriptional regulator DELLA protein N terminal 53 120 IPR021914 -
Dod04g0227 583 SMART DELLA_2 53 126 - -
Dod04g0227 583 Gene3D - 51 116 IPR038088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0227 Dod-Chr4 2833597 2836570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0227 1 575 GRAS Transcription Factor Family AT2G01570 60.000 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod04g0227 GRAS 4.7e-139 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0227 04 2833597 2836570 Dod04g0227 04 2833597 2836570 ECH