Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0188 ATGGGTGCTTTCTTCAATTCTTCACCACTCACACAGAGTTTCCAACTTTCTACCGTTCTCTCTCTCTCTCCCCCTACCATGGTTCTGTCCAAGACCGCCTCCGAGCCCGACGTCTCTGTCCACTCAACCTTTGCTTCACGCTATGTCAGGACCTCGCTTCCCAGATTCAAGATGCCTGAGGAGTCGATACCAAAAGAGGCAGCGTACCAGATCATAAACGATGAGCTGATGCTGGATGGGAACCCGAGGCTGAACCTGGCATCGTTCGTGACGACATGGATGGAGCCAGAGTGCGACAAGCTCATCATGGCTGCCATTAACAAGAACTACGTTGACATGGATGAGTACCCCGTCACCACTGAGCTCCAGAATCGTTGTGTTAACATGATAGCTCATCTTTTCAATGCACCACTTGGGGAGTCAGAGGCTGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCCATAATGTTGGCTGGTTTGGCCTTCAAAAGAAAGTGGCAGAACAAAAGGAAGAAAGAAGGAAAGCCTTATGACAAGCCCAACATTGTCACTGGAGCCAATGTCCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGCTGAAAGAAGTGAAGCTGCGTGATGGATACTATGTGATGGACCCTGAAAAGGCCGTGGACTTGGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCCACGCTGAATGGGGAGTTTGAAGATGTCAAGCGCTTAAATGATCTCCTAGCTGAAAAAAATAAGCAAACTGGATGGGAGACTCCTATTCATGTGGATGCAGCTAGTGGTGGCTTCATTGCCCCATTTCTTTATCCAGAGCTTGAGTGGGACTTCAGGTTACCACTGGTGAAGAGCATCAATGTGAGTGGCCACAAGTATGGTCTAGTCTATGCCGGAATTGGTTGGGTTATCTGGAGAAACAAGGAAGATTTGCCCGAGGAACTCATCTTCCACATCAACTATCTAGGAGCTGATCAACCCACATTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTCATTGCTCAATACTACCAACTAATTCGCCTGGGTTATGAGGGATATAGAAATGTGATGGAAAATTGTAGAGACAACATGATAGTGCTCAAGGAGGGACTTGAGAAAACAGGGCGCTTTGACGTTGTATCCAAAGACAACGGTGTTCCTTTGGTGGCCTTCACACTGAAGGACCACAGCCACTTTGATGAATTCCAAATCTCTGACTTTCTGAGGCGCTTTGGGTGGATAGTTCCAGCATACACCATGCCCCCAGATGCTCAGCACGTGACGGTGCTGCGTGTCGTCATCAGGGAGGACTTCTCAAGGACCCTCGCAGAGCGCCTTGTGGCCGATATAGAGAAGGTGCTGCATGAGCTTGATTTGCTTCCTGCGAAGGTCAGTGTGACAGTTAATGGAGAAGAGGGAGCAAACAATGGTGGCAAGCCTAAGAAGAGTCCCTTGGAGACACAAAGGGAGATCACTGCCGTTTGGAAGAAGTTTGTGCTGGAGAGGAAGAAGCTGAATGACAAGATGAATGGTGTTTGTTAG 1581 0.4864 MGAFFNSSPLTQSFQLSTVLSLSPPTMVLSKTASEPDVSVHSTFASRYVRTSLPRFKMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKKEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVDLVDENTICVAAILGSTLNGEFEDVKRLNDLLAEKNKQTGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMIVLKEGLEKTGRFDVVSKDNGVPLVAFTLKDHSHFDEFQISDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVADIEKVLHELDLLPAKVSVTVNGEEGANNGGKPKKSPLETQREITAVWKKFVLERKKLNDKMNGVC* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0188 526 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 42 470 IPR010107 GO:0004351|GO:0006536|GO:0030170
Dod04g0188 526 Gene3D - 387 474 - -
Dod04g0188 526 CDD DOPA_deC_like 85 465 - -
Dod04g0188 526 Gene3D - 27 91 - -
Dod04g0188 526 Gene3D - 92 386 IPR015421 GO:0003824
Dod04g0188 526 PANTHER GLUTAMATE DECARBOXYLASE 27 526 IPR010107 GO:0004351|GO:0006536|GO:0030170
Dod04g0188 526 SUPERFAMILY PLP-dependent transferases 41 470 IPR015424 -
Dod04g0188 526 PANTHER GLUTAMATE DECARBOXYLASE 27 526 - -
Dod04g0188 526 Pfam Pyridoxal-dependent decarboxylase conserved domain 59 407 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0188 Dod-Chr4 2294233 2302774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0188 27 526 Calmodulin-binding Proteins AT5G17330 83.992 0.0 881
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0188 04 2294233 2302774 Dod04g0188 04 2294233 2302774 ECH