Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3181 ATGGCTTCCTCAAGTGGAACATCTTCAGGGTCTTCTGTGCTTCAGAACTCAGGTTCTGAGGAGGACTTGCAGGCTTTGATGGATCAGAGGAAGAGGAAGAGAATGATATCAAACCGTGAATCAGCAAGGAGGTCAAGGATGAGGAAGCAGAAGCACCTTGATGATCTGGTTTCTCAGGTTGCTCAGCTCAGGAAGGAGAATCAGCAGATTCTCACAAATGTTAACATCACCACACAGCAGTACTTCAATGTTGAGTCTGAGAACTCAGTGCTGAGGGCTCAAGTTGAGGAGCTGAGCCGCAGATTGGAGTCCCTGAATGAGATCATTGACTTCTTGAATGCCAGCAATAGTGGGGTTTTTGGTGCATCAAGCTCATTCATTGAGCCAGCCATTAATAATAGCTTCTTCAACCCTTTGAATATGGCATATCTCAACCAGCCTATTATGGCCTCTCCAGACATGTTGCAGTACTGA 474 0.4599 MASSSGTSSGSSVLQNSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTNVNITTQQYFNVESENSVLRAQVEELSRRLESLNEIIDFLNASNSGVFGASSSFIEPAINNSFFNPLNMAYLNQPIMASPDMLQY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3181 157 MobiDBLite consensus disorder prediction 24 50 - -
Dod03g3181 157 Pfam bZIP transcription factor 30 87 IPR004827 GO:0003700|GO:0006355
Dod03g3181 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Dod03g3181 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Dod03g3181 157 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Dod03g3181 157 MobiDBLite consensus disorder prediction 1 23 - -
Dod03g3181 157 MobiDBLite consensus disorder prediction 1 50 - -
Dod03g3181 157 Gene3D - 28 83 - -
Dod03g3181 157 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Dod03g3181 157 Coils Coil 46 73 - -
Dod03g3181 157 Coils Coil 81 115 - -
Dod03g3181 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 155 - -
Dod03g3181 157 PANTHER BZIP TRANSCRIPTION FACTOR 1 155 - -
Dod03g3181 157 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3181 Dod-Chr3 64423042 64424596 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod03g3181 bZIP_1 1.3e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3181 03 64423042 64424596 Dod03g3181 03 64423042 64424596 ECH
Dod03g3181 03 64423042 64424596 Dod08g2216 08 49888382 49890276 ECH