Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3179 ATGGTCATGTCCATTATTGAGGATGAACTTGATGCAGAAGAGTTGCAGGCAGCTGCTGCTTTTCGCCAAGCACTCATTCTGGAAGAGCTTTTACCCTCAAAACATGATGATCACCATATGATGTTAAGATTCTTGAGAGCAAGGAAGTTTGATATCGAGAAAACAAAACAAATGTGGGCAGATATGCTTCAATGGAGGAGGGAATTTGGTGCGGACACCATCATGGAGGATTTTGAATTCAGGGAGATAGATGAAGTTCTGAAATACTATCCACAAGGGCATCATGGAGTTGATAAGGATGGAAGGCCTGTGTACATTGAAAGGTTGGGTCAAGTTGACTCTAACAAGCTAATACAGGTGACAACTATGGATCGTTATTTTAAGTATCATGTTAGAGAGTTTGAGAGGAACTTTGCTATTAAGTTGCCTGCTTGTTCAATCGCTGCAAGGAAGCACATTGACCAAAGCACAACTATCTTGGATGTCCAAGGAGTGGGTCTTAAAAGCATGAACAAAGCTGCAAGGGAACTCATCCAACGACTTCAGAAGATTGATGGTGACAACTATCCTGAGACCTTGAATCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGCTGTTGTGGAACACTGTTAAGTCATTCCTTGATCCCAAGACCGCCGCAAAAATCCATGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGACGCCAGTGAACTTCCAGAGTTCCTGGGTGGTACTTGTACTTGTGCAGATAAAGGTGGATGTATGCTTTCTGACAAGGGGCCATGGAATGACCCAGAAATCATGAAGATGGTTCAAAATGGCGAGGCAAAATGCAGTACAAAAACCTTGTCCATGATTGAGGAGAAAACAATCATTGAAGATGAAGCAACATACCAAAAGGTAATAAATCTCCAACTTCTTTACAATGTTGCAAAACAATGTGGTGTATATCATTATGACACCTTTGTCCCAATGATTGACAAGTCTGCCAACAAATCTTGGAATAAAGCAGTGCAAAACGATCAATTTGCACTGTCTGAAGATTGTTTCCCTTCGAATGCTAGCAAGACTTCTGACGGGTTTAGGAATCAACTTTTTGATGGAATCATGTCCATTGTGATGGGAATTGTTACCATGATCCGCTTGACAAGGACCATGCCAAGGAAAATCACTGCAATTGCCATGTATGGTAGCTCAGTATATTATGATGGCCCTGTGATGAAAGCACCTTCTGTTTCCATTGATGATCACATGGCCATGATGAAGCGCATGGTTGAACTAGAAGAGAAGGTGCAAGTTCTCAGCGTGAGACCTGCTATGCCACCCGAAAAGGAGGAATTGTTGAACAATGCTCTAAATAGAGTCAACACCTTGGAACAAGAGTTGGCTACGGCCAAAAAGACACTTAATGATGCCCTTGCTCTACAAGTGGAGCTCCAGACCTACATTGACAAGAAGAAGAAGAAGACGGTGGTAGGTCATCTGAACTTTGATACTGATTCATTTGCTTACCATGCATTAATATGA 1545 0.4188 MVMSIIEDELDAEELQAAAAFRQALILEELLPSKHDDHHMMLRFLRARKFDIEKTKQMWADMLQWRREFGADTIMEDFEFREIDEVLKYYPQGHHGVDKDGRPVYIERLGQVDSNKLIQVTTMDRYFKYHVREFERNFAIKLPACSIAARKHIDQSTTILDVQGVGLKSMNKAARELIQRLQKIDGDNYPETLNRMFIINAGSGFRLLWNTVKSFLDPKTAAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPEIMKMVQNGEAKCSTKTLSMIEEKTIIEDEATYQKVINLQLLYNVAKQCGVYHYDTFVPMIDKSANKSWNKAVQNDQFALSEDCFPSNASKTSDGFRNQLFDGIMSIVMGIVTMIRLTRTMPRKITAIAMYGSSVYYDGPVMKAPSVSIDDHMAMMKRMVELEEKVQVLSVRPAMPPEKEELLNNALNRVNTLEQELATAKKTLNDALALQVELQTYIDKKKKKTVVGHLNFDTDSFAYHALI* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3179 514 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 2 496 - -
Dod03g3179 514 SMART sec14_4 82 253 IPR001251 -
Dod03g3179 514 Coils Coil 454 481 - -
Dod03g3179 514 CDD SEC14 83 251 IPR001251 -
Dod03g3179 514 Pfam CRAL/TRIO, N-terminal domain 34 61 IPR011074 -
Dod03g3179 514 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 2 496 - -
Dod03g3179 514 Coils Coil 167 187 - -
Dod03g3179 514 SUPERFAMILY CRAL/TRIO N-terminal domain 8 78 IPR036273 -
Dod03g3179 514 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 82 256 IPR001251 -
Dod03g3179 514 Pfam CRAL/TRIO domain 88 250 IPR001251 -
Dod03g3179 514 SUPERFAMILY CRAL/TRIO domain 82 278 IPR036865 -
Dod03g3179 514 PRINTS Cellular retinaldehyde-binding protein signature 40 62 - -
Dod03g3179 514 PRINTS Cellular retinaldehyde-binding protein signature 242 251 - -
Dod03g3179 514 PRINTS Cellular retinaldehyde-binding protein signature 209 228 - -
Dod03g3179 514 Gene3D - 3 69 - -
Dod03g3179 514 SMART CRAL_TRIO_N_2 37 62 IPR011074 -
Dod03g3179 514 Gene3D - 70 282 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3179 Dod-Chr3 64379244 64384191 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3179 03 64379244 64384191 Dod03g3179 03 64379244 64384191 ECH
Dod03g3179 03 64379244 64384191 Dod02g0526 02 6860642 6866109 ECH
Dod03g3179 03 64379244 64384191 Dod08g2212 08 49806920 49813129 ECH