Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2923 ATGGTTTACTCTTCTATTCCAGTCTATGTAGATCCTCCCAATTGGCAGCAGCAACCAAATCATCGTCAAGTGAATGGAAGTGATAGCACGCAGCTGCTTCCACCGCTACCTCCACAGGTGGCTGCACCACCTATGGGGGGCGGTGTGGGCTCAATCAGGCCAAGTTCGATGGCTGATCAAGCCCGGCTAGCAAAGATACCGCCTCCAGAGGCGGCTCTCAACTGTCCTCGCTGCGACTCCACCAACACAAAATTCTGCTACTTTAACAACTACAGCCTCAGTCAGCCCCGCCACTTTTGCAAGACTTGTAGGCGTTATTGGACAAGAGGAGGAGCTCTCAGAAACGTTCCGGTTGGTGGTGGATGCCGCAGGAACAAGAAGAACAAAAGGAGCCGCTCCAAATCTCCTGCTGTAAACACTGAAAAACAAACACTCTCAAATTCCTCAAGTGCAATCCCTCCTTCAAGTGGCACCACTCATGAACTGATTGGTCAGTTGCCTCACCAGCCACCTAACCTACCCTTCATGGCCTCTCTTCAGAATCTGAACCGCTATGGTGTTGGAAACATGGGCCTAAGCTTGCGTGAGATCCAAGGGCAAACGGATCACATGGGGTTTCAAATTGGTGGTGGTGGCAATTCAGCTTCTTCTGCTGCTGCAGCTGCTAGTGGAGTTGATCAATGGAGGCTGCAGCAATTTCCTTTCTTGAATGGTTTCGAGTCATCTTCTACTTCAGCTGCTTCATACCCTTTTCAAAATGAAGGTATTAATGAAGCACCATCTGGCTTGGTTGGAGATGTAGCTGCGGGTTCTAGGGTTACTACGCAGCTGCCACCGATTAAGATGGAAGAAAATGGAGTCATGAATTTGTCAAGGTCACCTCTGAGTGTCTCAGAAAATAACCAATACTATTCATGGACTGATATGTCAGGTCTTGCTTCTTCTTCCACTAGTCATCTTTTGTAA 966 0.4855 MVYSSIPVYVDPPNWQQQPNHRQVNGSDSTQLLPPLPPQVAAPPMGGGVGSIRPSSMADQARLAKIPPPEAALNCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPAVNTEKQTLSNSSSAIPPSSGTTHELIGQLPHQPPNLPFMASLQNLNRYGVGNMGLSLREIQGQTDHMGFQIGGGGNSASSAAAAASGVDQWRLQQFPFLNGFESSSTSAASYPFQNEGINEAPSGLVGDVAAGSRVTTQLPPIKMEENGVMNLSRSPLSVSENNQYYSWTDMSGLASSSTSHLL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2923 321 MobiDBLite consensus disorder prediction 117 169 - -
Dod03g2923 321 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Dod03g2923 321 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Dod03g2923 321 MobiDBLite consensus disorder prediction 137 165 - -
Dod03g2923 321 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 6 318 - -
Dod03g2923 321 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 318 IPR045174 GO:0003700|GO:0006355
Dod03g2923 321 Pfam Dof domain, zinc finger 72 127 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2923 Dod-Chr3 61433052 61434912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2923 39 320 C2C2-Dof Transcription Factor Family AT3G55370 45.338 1.65e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod03g2923 zf-Dof 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2923 - - gmx:100816635 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2923 03 61433052 61434912 Dod03g2923 03 61433052 61434912 ECH
Dod10g1714 10 38277341 38279632 Dod03g2923 03 61433052 61434912 PCT