Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2843 ATGGATCCTTCTAGTGGACACCAGCAAATATCTGGCCAGTCACTTGAAAACATGTTGGCTTGTTCAAAAGCACAGCAGGAGAGGAAGCCTAGGCCACAGCCAGAACAAGCTCTAAAATGCCCCAGGTGCGAGTCCACCAACACCAAGTTCTGCTACTACAACAACTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAGTCCTGCAGGAGGTACTGGACCAAAGGAGGGACACTGAGGAATGTTCCAGTGGGTGGAGGGTGCAGGAAGAACAAGAGATCATCATCATCATCATCAAAGAGGGGTCAAGATCAAGCCTTCAACACAAATCATCCAAACCCCCTCTCTGGCCTCCCTCACTTGTCCTATGACTCAAGTGACTTCAGCCTTGCATTGGCTAGGCTCCAAAAACAGTCATGTGGCCAACTTGGTTTTGATGACCACCATGATCTTTCAATTTTGGGGAACCCCACAAGCACAAGACCTTGTGACGTTCTAGGCATGAACAACATCAATTCTTCAACAACAGGATTCTTGGATGCACTTAGGAATGGGTTCCTGGGAGCCCAAAATAACAACAACCACCACCACCACCACCTTCAGAATTTGTGCTATGGATATGGGAATGGGGACATGGGGGAAGTGGATAATGGCAATGCTTGTGGGATTGGGGTTAGTAGTGGTGGAGATATGATGCTTCCTTATGATCAAGAAATGACTAGTGTTGCAACCACTCAAGCAGTGAGTGTCACAACAATGAAGCAAGAAATCTGCAATGGAAGGGAATTGCAAAGTGATCATAGCAACAGGGTGTTGTGGGGTTTCCCTTGGCAGCTCAATGGGGACACAAACATGGGCGAATTTGACTCTGCAAGAGCAAGTTGGAACAACAATCTCGCTCCATCATGGCATGGACTTCTCAATAGTCCCCTAATGTAG 936 0.4754 MDPSSGHQQISGQSLENMLACSKAQQERKPRPQPEQALKCPRCESTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSKRGQDQAFNTNHPNPLSGLPHLSYDSSDFSLALARLQKQSCGQLGFDDHHDLSILGNPTSTRPCDVLGMNNINSSTTGFLDALRNGFLGAQNNNNHHHHHLQNLCYGYGNGDMGEVDNGNACGIGVSSGGDMMLPYDQEMTSVATTQAVSVTTMKQEICNGRELQSDHSNRVLWGFPWQLNGDTNMGEFDSARASWNNNLAPSWHGLLNSPLM* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2843 311 MobiDBLite consensus disorder prediction 89 118 - -
Dod03g2843 311 MobiDBLite consensus disorder prediction 1 21 - -
Dod03g2843 311 MobiDBLite consensus disorder prediction 83 118 - -
Dod03g2843 311 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
Dod03g2843 311 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Dod03g2843 311 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Dod03g2843 311 MobiDBLite consensus disorder prediction 1 38 - -
Dod03g2843 311 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 7 310 - -
Dod03g2843 311 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 310 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2843 Dod-Chr3 60308497 60310576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2843 1 311 C2C2-Dof Transcription Factor Family AT2G28510 39.942 1.10e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod03g2843 zf-Dof 8.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2843 - - gmx:100799737 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2843 03 60308497 60310576 Dod03g2843 03 60308497 60310576 ECH
Dod10g1649 10 37462155 37464021 Dod03g2843 03 60308497 60310576 PCT