Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0526 ATGGCTGAAGTGGAAAGAGGCCAAGAGACTAGTCATCAAGGGATCAAGCTCTTTGGAGCAACGATTATATTGGACGGTGGGGATGTGAACGAGGGCAAGAAAGGGAGCGAAGATCAGACGGTGGAGAAGAGGCCAGATAAGATCATAGCGTGCCCAAGATGCAAGAGCATGGAAACAAAGTTCTGTTACTTTAACAACTACAACGTTAATCAGCCAAGGCATTTTTGCAAGGGATGCCAACGCTACTGGACGGCCGGCGGGGCCCTCCGTAACGTCCCTGTCGGTGCCGGCCGCCGGAAGGCCAAGTCGCCTGGCCGTGGCGCCGCCGCTGGATTCACAGACGGTTGCTTGTATGAAACTTCTTCCGATGATGAACGACACAAGTTTGGGTTGGAACACGGGTTGGTTTTGGATGAGTGGCACGTTGCCATGCCTCACGGTGGTTTCCAGCAGCTTTTTCCGGACAAGCGGCGGAGGACGGCCTCAGCTCAGCGTCAAGGTCAATGA 507 0.5444 MAEVERGQETSHQGIKLFGATIILDGGDVNEGKKGSEDQTVEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKSPGRGAAAGFTDGCLYETSSDDERHKFGLEHGLVLDEWHVAMPHGGFQQLFPDKRRRTASAQRQGQ* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0526 168 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Dod03g0526 168 PANTHER CYCLIC DOF FACTOR 2 9 163 IPR045174 GO:0003700|GO:0006355
Dod03g0526 168 Pfam Dof domain, zinc finger 47 103 IPR003851 GO:0003677|GO:0006355
Dod03g0526 168 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Dod03g0526 168 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 9 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0526 Dod-Chr3 6356593 6359040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0526 13 162 C2C2-Dof Transcription Factor Family AT2G34140 54.491 1.25e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod03g0526 zf-Dof 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0526 - - tcc:18596691 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0526 03 6356593 6359040 Dod03g0526 03 6356593 6359040 ECH