Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0440 ATGGCTTCCTCTGGTAGTAGGGTAATGGAAAAACCAGGTCAAGAGCTTCTTCAGCAGCAACAACAAGCCCTCAATTGCCCTCGCTGCAACTCATCAAACACAAAGTTCTGCTACTACAACAACTACAGCTTGTCTCAGCCAAGGCACTTCTGCAAAGCCTGCAAGCGTTATTGGACAAGAGGTGGAACCTTAAGGAACGTTCCCGTTGGTGGGGGATGCAGAAAAAACAAGCGTGTGAAGCGTCCAACAACAATTGATGCTGCTTCTTCTTCTTCTTGTTCTCCTTCTTCAGCTCCACAACCCCAGATCGATGCTGCTTCAACTTCAAATCACATCAACCCTTTGTTTTACGGGCTAGCTAGCAACCCTTGTGATGTGAATCTTCCCTTTATTTCAAGGTTCAGTTCAAGAATCTCAAGTTCTGGATTTGATCTTCAGCCTCAGCTGAGTGCACTTGGGTTAGGTTTTTCGTCCGGGGCTACGTCCATTGAAGCAGGTGATAATATCGGTTACAGGAATGGATTAACTTCAGATAATAATGATACGCTTCTTTCAAGCTATAGTTCCATCTTCAGTTCTTCATCTTCAACTTGTACATCAACTACTACTTCTCCTCTTCCAGTTATGATGCCTAATTCTTCACTGTTGGGCTCTACTCTGATGATGCAACAAAAGCTCATCAATGGTGGTGGTGTGAAAAATGGTCCAGGTGGCAACACTACTTTTCAGGGATTAGTAGCCCCACTAGATCAGCAGTTGCAAATGGCAAGTGATGATCATAGCGGTGAGGGTGCAGGGATGGTAGTGGCTTTGAAAGACGTGAAAGCAGAATTAGGACAGAACAGGTTGGAGCTGTGGAATAATGGTACTACTACTGCTGCTAATTGCCAAAACCAGATCGAGCATGTGACGAGCTTGTCCAATCCTAATTCCCTTTTTTGGAATTCAACAACAGCGTTGGGTGCTTGGAACGATCAACCTAATAATATTGGTCCATCAGTCACTTCTCTGATCTAG 1017 0.4454 MASSGSRVMEKPGQELLQQQQQALNCPRCNSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPTTIDAASSSSCSPSSAPQPQIDAASTSNHINPLFYGLASNPCDVNLPFISRFSSRISSSGFDLQPQLSALGLGFSSGATSIEAGDNIGYRNGLTSDNNDTLLSSYSSIFSSSSSTCTSTTTSPLPVMMPNSSLLGSTLMMQQKLINGGGVKNGPGGNTTFQGLVAPLDQQLQMASDDHSGEGAGMVVALKDVKAELGQNRLELWNNGTTTAANCQNQIEHVTSLSNPNSLFWNSTTALGAWNDQPNNIGPSVTSLI* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0440 338 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 12 322 - -
Dod03g0440 338 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Dod03g0440 338 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Dod03g0440 338 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Dod03g0440 338 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 322 IPR045174 GO:0003700|GO:0006355
Dod03g0440 338 MobiDBLite consensus disorder prediction 75 105 - -
Dod03g0440 338 MobiDBLite consensus disorder prediction 83 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0440 Dod-Chr3 5373427 5376928 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0440 4 84 C2C2-Dof Transcription Factor Family AT5G65590 67.901 1.18e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod03g0440 zf-Dof 4.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0440 - - ccaj:109814566 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0440 03 5373427 5376928 Dod03g0440 03 5373427 5376928 ECH
Dod04g1452 04 36160402 36162969 Dod03g0440 03 5373427 5376928 PCT