Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0386 ATGGGTTTGAGTTCTAAGAAGGTTTGTAGCACAGGACTTGATTGGAACCAGACCTTGTTGCAATCACAAAACTTGGAGCTCCCAAAGCCTGTTCCTCTCATGAGGAAACAACAGCAACAAACTCAGCAACCTGAGCCTTTGAAGTGCCCAAGATGTGATTCCACAAACACCAAGTTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGTAAGAGGCACTGGACTAAAGGTGGGACTCTTCGCAATGTTCCTGTTGGTGGTGGCAGGAAGAACAAGAGAGCCAAGAAATCGACCACCCCAAACACTGCCACCACAACTTCTACTAGCACCACCACTGTCACCACCTCAAATGGCAACATGACAGTTCCTCCTCTTGCTTTGGATGATCACAAAAGCATGCCTTCCTCCCTCTACCAATCTATGATTCGTCCACCACCTTTGCTGCCACAACAGAACCTGATGAGCATCAGAGACTCAGAAGTTAAAGACTTTGGTGGTGGCATGTTTCTGAGTTCACCTATGCAACTTCCTCAAAGCCCAGGCCTAATCTTCCCCTTCTCAACATCAAGTTCTTTTGATGCAAACCCATGTTCAGTGTCAACCTCCAATGTTTATAGCTATGGGGAAGAGTTTAAAACAATGGAGGAGCCAACCATTCGTACCAGCATAATGCCAAGCACTAATGGTACTAACACACAGCTATGGGAGATACCTGCAACAAGCACTCGCATGGAAATGTCAAACTATTGGGGCTGGGAGGACCTTGATTCGTTGGTCTCAACTGATCTGAATGTTCCTTGGGATGATTCTGATATTAAGCCTTGA 846 0.461 MGLSSKKVCSTGLDWNQTLLQSQNLELPKPVPLMRKQQQQTQQPEPLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRAKKSTTPNTATTTSTSTTTVTTSNGNMTVPPLALDDHKSMPSSLYQSMIRPPPLLPQQNLMSIRDSEVKDFGGGMFLSSPMQLPQSPGLIFPFSTSSSFDANPCSVSTSNVYSYGEEFKTMEEPTIRTSIMPSTNGTNTQLWEIPATSTRMEMSNYWGWEDLDSLVSTDLNVPWDDSDIKP* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0386 281 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Dod03g0386 281 PANTHER OS06G0284500 PROTEIN 17 168 - -
Dod03g0386 281 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 168 IPR045174 GO:0003700|GO:0006355
Dod03g0386 281 MobiDBLite consensus disorder prediction 85 127 - -
Dod03g0386 281 Pfam Dof domain, zinc finger 46 100 IPR003851 GO:0003677|GO:0006355
Dod03g0386 281 MobiDBLite consensus disorder prediction 104 127 - -
Dod03g0386 281 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0386 Dod-Chr3 4790653 4791836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0386 41 115 C2C2-Dof Transcription Factor Family AT5G66940 65.333 4.88e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod03g0386 zf-Dof 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0386 - - gmx:778119 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1506 04 36663943 36666210 Dod03g0386 03 4790653 4791836 PCT