Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3687 ATGGATCCACCACCACCACCACTGCCACTGTCAGCGCCACCCCTTTCATCCAGCGTGGCTCCTACCCCCGCCACGGCCGCAACCGCCGCCTCAAACCAACCGAATAACCCTGACTCAGTGGAATCCTCGCCACGCTCCCGCATTGTTGAAACATGGAATGATGAGCCTATACCGCCTGTCCCCGGCGCCAAGCTCCGCCTCATGTGCAGCTACGGCGGCCACATCATGCCACGTCCCCATGATAAGTCCCTCTGCTACGTAGGCGGCGACACTAGAATCGTTGTGGTGGACCGCAATTCCAGCCTGAAGGACCTCTGCTCACGCCTTTCCGGCACCCTCCTCAATGGAAGACCCTTCACTCTTAAGTACCAATTGCCCAATGAGGACCTTGACAACCTCATCACAGTCACCACCGATGAAGACCTTGACAACATGATCGAAGAGTATGATCGTATTGCTGCAGCAGCAGCATCCTCTGCTTCTCCCCTGAAGCCTTCACCTTCAAGGCTCAGGGTGTTCCTGTTCTTCTCCAAGCCAGAGTCCTCTGTTTCAACGGGGTCACTCCTTGATGATGCAAAGTCTGAGACATGGTTTGTTGATGCACTCAACAACTCAGGGATCCTCACCAGGGGTGTTTCGGATTCGGCTGCAGGGAATTGCTTTGTGAACCTTGATGGTGTTAGTGTTGGTGTTGGTGTTGGTGTTTCTGCAAGTGGTTCAAGCAACAACTTGGAGGCTCAGGGTGCTGCAGCAGAGTCTTTGGCTCTTGCTGATAATAGCAACGGAAGCAACAACAACAACAACAAGATTAAGAATTTGCAAGATGCTGTTGCTGTGAATTCATTGCCTGGCTCACCTTCTTCTTCTTCTTCTCCTTCAATGGCTAATCTGCCTCCGATTCGGGTTCGTGTCGATGAAAATGGGGGTAGTAGGCTTCAGCAGGAGCAGAGGATTGGGGTGATGGAGGAGCAGTTTGCACAGATGACACTTGGTGCAAGTGGTGGTGTGAGGCAAGATGATGGTTATGTTGTTGTTCCCTCTGCTGTGGCCATGCCTGCAGTTCCTGCAGTTGTGACTATGGCTACAGCGGCAATGGTTACTGGTGTTGATAACATGAACAGGGTTGTTTCTGATGATGAGAGATCAGATTCTGGGGTGCCTCTTGGGTTTAGGAAGCCCCCTTTGCCATTGCAGCTTGTTCAACCAAGGACTAGTGGTGGTGTCAGTTTGCCTTCTCCGGATTCAGTTGCAAGTGATAGTAGTAGTATTGCATCCACAAATTCTTTCTCCAAGAATGTCTACTATCAAGAACAAGTCCAAGCTTCACATCTAGACAACAAATCTGCTGCTTTGAATATTGCCAAAAGTGAAATATCTGATCACATCCCTGGACTACAAAGGGAACAAATTCAGGATTCTGGTTACACATTACCCCCACAATTGGATCCAAATCAGCAACAACAATTTTTCCATGCTGGCACTCACTACATTCACCATCCTGCTGCCACAGGTACAGTGCCAGTATCATCCTACTACCCAGTTTATGCCCCACCATCACAGCCACAACTTCATCATCCCATTGGTCAACAGCAATACCCAGTTTATGTTATGCCTGTTGGACATACACAACCATACAATGTAACATTGCAACACAATATTGCTGATCCAAATGTGGTAGCCTCAGGCAGGCCACTAGTACCTCAAAATGTTGCACCCTCAACAGCATACAAAGAAGGCACACCACCAATTTACCCTCCTAGGCCAACTACCCCAACTATACCAGATGTGACTCCTACTGTGTACAAGGCTCCTGTGTCATCAAATCCTGCATTTGTGCAAATTCCTTCAAATCAATTTCAGCAACAGTATGTGGGTTTGCCTACTCAAGTACATCATCCAACACAGCCAATTGCTGTAGCTCCATCTGGTGCTACTGCTAACTATGGTTATGAATATGGTGGTGGCACTTTAAAAGACCAAGCATACTACACACAACAAACTAGTGCTGCTGCTCCATTGCCTTCTCAGTACCAATCCATGACCCCAGCAGCAGCTGCTGCAGCCCTGTCAGATGCTTCAAAGCAGTTCCATAATGATAATATTCAGCCGCCAAACAGAACTTCACAGCCAGTATAA 2136 0.4869 MDPPPPPLPLSAPPLSSSVAPTPATAATAASNQPNNPDSVESSPRSRIVETWNDEPIPPVPGAKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIVVVDRNSSLKDLCSRLSGTLLNGRPFTLKYQLPNEDLDNLITVTTDEDLDNMIEEYDRIAAAAASSASPLKPSPSRLRVFLFFSKPESSVSTGSLLDDAKSETWFVDALNNSGILTRGVSDSAAGNCFVNLDGVSVGVGVGVSASGSSNNLEAQGAAAESLALADNSNGSNNNNNKIKNLQDAVAVNSLPGSPSSSSSPSMANLPPIRVRVDENGGSRLQQEQRIGVMEEQFAQMTLGASGGVRQDDGYVVVPSAVAMPAVPAVVTMATAAMVTGVDNMNRVVSDDERSDSGVPLGFRKPPLPLQLVQPRTSGGVSLPSPDSVASDSSSIASTNSFSKNVYYQEQVQASHLDNKSAALNIAKSEISDHIPGLQREQIQDSGYTLPPQLDPNQQQQFFHAGTHYIHHPAATGTVPVSSYYPVYAPPSQPQLHHPIGQQQYPVYVMPVGHTQPYNVTLQHNIADPNVVASGRPLVPQNVAPSTAYKEGTPPIYPPRPTTPTIPDVTPTVYKAPVSSNPAFVQIPSNQFQQQYVGLPTQVHHPTQPIAVAPSGATANYGYEYGGGTLKDQAYYTQQTSAAAPLPSQYQSMTPAAAAAALSDASKQFHNDNIQPPNRTSQPV* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3687 711 MobiDBLite consensus disorder prediction 279 296 - -
Dod02g3687 711 MobiDBLite consensus disorder prediction 17 46 - -
Dod02g3687 711 MobiDBLite consensus disorder prediction 402 423 - -
Dod02g3687 711 PANTHER OS05G0427100 PROTEIN-RELATED 13 702 - -
Dod02g3687 711 MobiDBLite consensus disorder prediction 1 16 - -
Dod02g3687 711 MobiDBLite consensus disorder prediction 279 298 - -
Dod02g3687 711 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 13 702 - -
Dod02g3687 711 Gene3D - 84 175 - -
Dod02g3687 711 Pfam PB1 domain 80 175 IPR000270 GO:0005515
Dod02g3687 711 MobiDBLite consensus disorder prediction 1 46 - -
Dod02g3687 711 CDD PB1_UP2 68 175 - -
Dod02g3687 711 MobiDBLite consensus disorder prediction 377 423 - -
Dod02g3687 711 MobiDBLite consensus disorder prediction 688 711 - -
Dod02g3687 711 SUPERFAMILY CAD & PB1 domains 80 185 - -
Dod02g3687 711 SMART PB1_new 79 175 IPR000270 GO:0005515
Dod02g3687 711 ProSiteProfiles PB1 domain profile. 64 175 IPR000270 GO:0005515
Dod02g3687 711 MobiDBLite consensus disorder prediction 693 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3687 Dod-Chr2 75513447 75516190 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3687 53 204 MAP Kinase Kinase Kinase AT5G57610 42.208 6.08e-26 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0138 06 1930087 1932740 Dod02g3687 02 75513447 75516190 ECH
Dod02g3687 02 75513447 75516190 Dod02g3687 02 75513447 75516190 ECH