Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2103 ATGAGTGGTGCAGGGGACATGTCTGATAAGGATCCGGGTATCATGCTCTTTGGCATGAAGATTCCGTTACCGGAATGTCAGATTCCGGCGAGCTCTCAAATGGGTTGTCAGATTCACGCCAACTCTGCAACCATGAATGCTTGCAGCAGCCTGCAAAAGACAGAAGTTGAAACACACCGTGCTCAAAACTCTGAGCAAACAAAGAATACTTCTGATTTAGGAGATAGCAAACAAGAGTCCCAGAATAATGAACAAGAAAATGAGCCAAAAGTAAACCCTAAGGCTGTGGAAGACAATAGGGAGTCTAGTAATACAGATCAAGACAAAAGCTTTAAGAAACCAGACAAGATTCTTCATTGTCCACGCTGCAATAGTTTGGACACTAAGTTTTGTTATTTCAACAACTACAATGTCAATCAACCTCGGCATTTCTGCAAGAGCTGCCAAAGGTACTGGACCGCTGGTGGGACAATGAGAAATGTTCCGGTGGGAGCTGGAAGACGGAAAAATAAACACTTGTCCCCTCAATGCCACCACATCATTGTAGCCTCTGATGGAATCCCTACCGACAGGTTAGAAACCGAAGACTCATGTGATCACCACCAACTTGACTCAACTCTTGAATCTGCTGCTTTCAGGTCTTCTACAGATAATGGTACCGTATTGAAATTTGGTCCAGATGTCCCTCTCTGTGAATCCATGGAGTCAATGCTAAATCTTAGGGACCAGAAACGAAGTGTTGATGTGAGATCAATCAATTGTGCAGAAAATGGGGAGGAAGAGCCATCCTTATGTGTATCAACTGTGACAAATGCTTGTACTGCAGGAAATGAATCATTAGAACGTCTTCCATCGAGACCTTCGCAATGTTACCCTGTTCCTCCATGGGTATTTCCTTGTAATCCAGGCTGGAACAATGTGCAAGTTCATCAATCTTCAGCACACGTGTGTAACCCATACAGCACTGCTCCTGCCGCAATGCAGTGGTGTCCCACGCCAATGGTGGCAGTTGCAACCATTTGCCCACCAAGCATTCCATTGCAATTTGTTCCAGGACCATACTGGAGTGGAACACCTGTGTGGGCTGCTGGAACCGGGACAGCTTCAATAGGATCCAATGGTTGCCTTTCCTCATCTTCCTCGACTGGTAACAACTGCTGCTCAGGCAATGGTTCCCCAACCCTTGGCAAACACACAAGAGATACTGTTTTCACTGATGAAGAGAAATCAGAAATGTGTGTTCTGGTTCCTAAGACCCTTAGAATTGATGATCCCTATGAGGCCTTAAAAAGTCCTATTTGGGCTACATTAGGTATCAAACCTGACAATCAGCTGTCTGAATCAGAAAATGCTATTTTGAAAAAAGTTGAACATAAAGAAGGCAAAGATCGTGTATTAGGTGTGTCTCAAATCTTGGAAGCTAACCCTGCAGCTATTTCTCGTGCTCACGCATTACAGGAGAGCATATAA 1470 0.4449 MSGAGDMSDKDPGIMLFGMKIPLPECQIPASSQMGCQIHANSATMNACSSLQKTEVETHRAQNSEQTKNTSDLGDSKQESQNNEQENEPKVNPKAVEDNRESSNTDQDKSFKKPDKILHCPRCNSLDTKFCYFNNYNVNQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKHLSPQCHHIIVASDGIPTDRLETEDSCDHHQLDSTLESAAFRSSTDNGTVLKFGPDVPLCESMESMLNLRDQKRSVDVRSINCAENGEEEPSLCVSTVTNACTAGNESLERLPSRPSQCYPVPPWVFPCNPGWNNVQVHQSSAHVCNPYSTAPAAMQWCPTPMVAVATICPPSIPLQFVPGPYWSGTPVWAAGTGTASIGSNGCLSSSSSTGNNCCSGNGSPTLGKHTRDTVFTDEEKSEMCVLVPKTLRIDDPYEALKSPIWATLGIKPDNQLSESENAILKKVEHKEGKDRVLGVSQILEANPAAISRAHALQESI* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2103 489 PANTHER CYCLIC DOF FACTOR 3-LIKE 7 488 - -
Dod02g2103 489 PANTHER CYCLIC DOF FACTOR 2 7 488 IPR045174 GO:0003700|GO:0006355
Dod02g2103 489 MobiDBLite consensus disorder prediction 79 113 - -
Dod02g2103 489 ProSitePatterns Zinc finger Dof-type signature. 120 156 IPR003851 GO:0003677|GO:0006355
Dod02g2103 489 ProSiteProfiles Zinc finger Dof-type profile. 118 172 IPR003851 GO:0003677|GO:0006355
Dod02g2103 489 MobiDBLite consensus disorder prediction 54 113 - -
Dod02g2103 489 MobiDBLite consensus disorder prediction 54 78 - -
Dod02g2103 489 Pfam Dof domain, zinc finger 115 172 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2103 Dod-Chr2 41147598 41150839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2103 11 488 C2C2-Dof Transcription Factor Family AT5G39660 36.090 8.12e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod02g2103 zf-Dof 4.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2103 - - ccaj:109792807 738.028