Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0663 ATGATTCAAGAACTGTTTGCTGGTTCCAACCTTATAGCAGGTGAAGGGAAAATCTCCATTAACGGAGGATCAGTTCTTCTACCACCAGCACCATCTCCTGCTACTTCTCTCCCTTCTTCACCACCTCCTTCTTCCACCACCACCCCTTCTACGGTCACCACCACTCCAACCTCCGCAAATTCAGAAAACCAGAATCTGAGGTGCCCGCGATGCGATTCCTCGAACACAAAGTTCTGCTACTACAACAACTACAACCTCACGCAGCCTCGCCACTTCTGCAAGACGTGCCGCCGCTACTGGACCAAAGGCGGCGCTCTCAGGAACGTCCCCATCGGAGGTGGCTGCCGGAAAAACAAGAACGTCGGAGTGTCCAACTCGGTGGCTAAGGCCAGCACTGCCACAAAGATGAAAGCAGTGGCATCTGAGTTTGGGAGGTCAGGGTTTGCTTCCGGGTTCGACCAGGAGCTTCAAGTTCAACAAAGCCCGATCCTATGGGGTTCACCACAAAATACTCATCTCTTGGCGTTACTGAGAGCTAGCCAGAGTCAAAACCCTAACCCTAACCCTAGTTCCATGTCTGTTAATGCTGTTACAGTCAAGGAAGAAGGGAACTTGATGGGAACCCAGTCCCACATGGTGGCTGAGCCGTTGATTGCAAATGGGTTGTTTAATCCTAGAGCCCTAGGGTATGATGTTGGACAAGTAGTTCCTTCACTGGGTCTATGCAGCTCTTTGTGGAGAAACAACAATCAAGATCAACCTCAGCAACAAAATAGCGGCTTTGTACTTGGGGAACATCAAAGCAGTGGAATTCAAGAGCTTTACCACAAGCTCAGGTCAACATCAGCTAATTATTGCAGTGATAACTCGCAAATGTTTATGGGAAACGTGGCTGCTTCATCCTCTTCTTCTTCTTTATCCACTATTTTGGAGTCATCTTCAGTTGCTGGTGGTGAATTGGGGTGCTGGAATCCAACCCTTCAGTGGTCTGATCTTCCAACAACCAATGGTGCATATCCTTAA 1023 0.4888 MIQELFAGSNLIAGEGKISINGGSVLLPPAPSPATSLPSSPPPSSTTTPSTVTTTPTSANSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNVGVSNSVAKASTATKMKAVASEFGRSGFASGFDQELQVQQSPILWGSPQNTHLLALLRASQSQNPNPNPSSMSVNAVTVKEEGNLMGTQSHMVAEPLIANGLFNPRALGYDVGQVVPSLGLCSSLWRNNNQDQPQQQNSGFVLGEHQSSGIQELYHKLRSTSANYCSDNSQMFMGNVAASSSSSSLSTILESSSVAGGELGCWNPTLQWSDLPTTNGAYP* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0663 340 MobiDBLite consensus disorder prediction 28 65 - -
Dod02g0663 340 PANTHER DOF ZINC FINGER PROTEIN DOF5.1-LIKE 20 338 - -
Dod02g0663 340 MobiDBLite consensus disorder prediction 31 45 - -
Dod02g0663 340 ProSitePatterns Zinc finger Dof-type signature. 68 104 IPR003851 GO:0003677|GO:0006355
Dod02g0663 340 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 338 IPR045174 GO:0003700|GO:0006355
Dod02g0663 340 MobiDBLite consensus disorder prediction 46 65 - -
Dod02g0663 340 Pfam Dof domain, zinc finger 64 120 IPR003851 GO:0003677|GO:0006355
Dod02g0663 340 ProSiteProfiles Zinc finger Dof-type profile. 66 120 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0663 Dod-Chr2 8631995 8633241 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0663 29 119 C2C2-Dof Transcription Factor Family AT5G65590 60.215 1.24e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod02g0663 zf-Dof 3.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0663 - - gmx:778100 419.083