Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0526 ATGTCTGGACCTCTCTCTCCCAGGACAAGCGGAGTAGCAAGGTTATGTCCGGTTGAAATTGAGGACTTCCACGATGCTGAGGAGATGAAAGCTGTTGATGAGCTCCGTCAAGCTCTTATATTGGACGAACTACTTCCTGCAAAGCACGATGATTATCATATGATGCTTAGATTCCTAAAGGCCAGAAAATTTGATATTGAGAAGACAAAGCAAATGTGGTCTGACATGCTAAAGTGGAGGGAGGAATTTGAAGCTGATACTATTATAGAGGACTTCGACTTCAATGAAATCGAGGAAGTGGTAAAATATTATCCCCAGGGACACCATGGAGTAGACAAAGAGGGACGACCTATTTACATAGAGAAACTGGGACAAGTGGATCCTACCAAGCTCATGCAAGTCACAACCCTCGATCGTTATGTCAAATACCATGTTCAGGAGTTTGAAAAGACTTTTGATATAAAGTTTGCTGCTTGTTCCATTGCTGCAAAGAAGCATATCGATCAAAGTACAACCATCCTGGATGTGCAGGGAGTGGGGATTAAAAACTTCAGCAAAAGTGCTAGGGAGCTCGTCCTTCGCCTTCAGAAGATTGATGGTGACAACTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCAGGTCCTGGATTCAAAATTCTATGGAACACCGTAAAAAGCTTCCTTGATCCTAAGACCGCAGCGAAAATTAATGTTCTTGGCAACAAGTATGACAACAAATTGCTTGAAATAATTGATGCAAGTCAATTGCCTGAGTTTTTAGGAGGTACTTGTACCTGTGCTGATCAAGGAGGTTGCATGCGTTCTGATAAGGGCCCATGGAAGGATCCAGAGATAATGAGGATGGTTCAAAATGGTGAACACAAATGTTCAAAAAGAAAAGAGTCTCAAGCGGCGGAAGAGAACATCTATGAGTGTGGCATCCATGTTTCCTTCACATTAGTAATTTGGAATTACACCTGGTATTTAGATGGAGCAGATTGCCGTGTCATGGCTGATATGAGCAAGATTCCCGAAAATTACCAGATTTTCAATGGCCTGATGGCCTTTGTTATGGGTATCTTCACCATGGTGAGGGTATCAAAAAACATGCCCAAGAAGCTCAGTGACACTGATGCCAACTTCAAATCGAATTCTGTTAATTGTGATGATCATGAATGTAATGATGATGATGGGGATGAGGACCCTTCTGACCTATTCCCTGATCCTCCCAATGCCCTCTCTCCTGCAGAGTTTATGGCCGTGATGCAACGCATGGCTGAGTTGGAGCAGAAAATGCTCCACATGAACCACCAGCCTGTTGCCATGCCCCCTGAGAAGGAGGAAATGCTCCATGCTGCTATCACCCGAGCTGATGCCTTGGAGAAACGACTCTTGTCTACCAAGAAGGCACTGGAGAATTCACTTGCCAAGCAAGAGGAGCTTTCGGCTTATGTTGAGAAGAAGAAAAAGAAGAAGAAGATGTTCTTCTGGGGCGGGGATGAAGGCTTTGCCTTCTTGGCTCTTGCTACAGATTCTTTCGGCCAGAAGCAATTGCTAGGCCTTTTATCTTAG 1578 0.4404 MSGPLSPRTSGVARLCPVEIEDFHDAEEMKAVDELRQALILDELLPAKHDDYHMMLRFLKARKFDIEKTKQMWSDMLKWREEFEADTIIEDFDFNEIEEVVKYYPQGHHGVDKEGRPIYIEKLGQVDPTKLMQVTTLDRYVKYHVQEFEKTFDIKFAACSIAAKKHIDQSTTILDVQGVGIKNFSKSARELVLRLQKIDGDNYPETLNRMFIINAGPGFKILWNTVKSFLDPKTAAKINVLGNKYDNKLLEIIDASQLPEFLGGTCTCADQGGCMRSDKGPWKDPEIMRMVQNGEHKCSKRKESQAAEENIYECGIHVSFTLVIWNYTWYLDGADCRVMADMSKIPENYQIFNGLMAFVMGIFTMVRVSKNMPKKLSDTDANFKSNSVNCDDHECNDDDGDEDPSDLFPDPPNALSPAEFMAVMQRMAELEQKMLHMNHQPVAMPPEKEEMLHAAITRADALEKRLLSTKKALENSLAKQEELSAYVEKKKKKKKMFFWGGDEGFAFLALATDSFGQKQLLGLLS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0526 525 SUPERFAMILY CRAL/TRIO domain 96 292 IPR036865 -
Dod02g0526 525 Gene3D - 84 296 IPR036865 -
Dod02g0526 525 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 344 496 - -
Dod02g0526 525 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 13 313 - -
Dod02g0526 525 SMART sec14_4 96 267 IPR001251 -
Dod02g0526 525 MobiDBLite consensus disorder prediction 376 411 - -
Dod02g0526 525 Gene3D - 19 83 - -
Dod02g0526 525 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 96 270 IPR001251 -
Dod02g0526 525 PRINTS Cellular retinaldehyde-binding protein signature 223 242 - -
Dod02g0526 525 PRINTS Cellular retinaldehyde-binding protein signature 54 76 - -
Dod02g0526 525 PRINTS Cellular retinaldehyde-binding protein signature 256 265 - -
Dod02g0526 525 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 344 496 - -
Dod02g0526 525 SUPERFAMILY CRAL/TRIO N-terminal domain 24 92 IPR036273 -
Dod02g0526 525 Pfam CRAL/TRIO, N-terminal domain 48 75 IPR011074 -
Dod02g0526 525 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 13 313 - -
Dod02g0526 525 Coils Coil 459 483 - -
Dod02g0526 525 CDD SEC14 97 265 IPR001251 -
Dod02g0526 525 Pfam CRAL/TRIO domain 102 264 IPR001251 -
Dod02g0526 525 SMART CRAL_TRIO_N_2 51 76 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0526 Dod-Chr2 6860642 6866109 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0526 02 6860642 6866109 Dod08g2212 08 49806920 49813129 ECH
Dod02g0526 02 6860642 6866109 Dod02g0526 02 6860642 6866109 ECH
Dod03g3179 03 64379244 64384191 Dod02g0526 02 6860642 6866109 ECH