Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0446 ATGGTCTTCCCATCCCTTCCACTCTATCTAGATCCACCCAACTGGTCACAACAGCAACCTAATCAACAAGAAGGAATTGGCACCCAGAATCCCCTGATTTCACCTCCTTTGCAGCCACCGCCTCCAACGATTGCAGTGGTTGTTGGAGGTGGTGGCTATCAAGGCTCTATCAGACCGGGATCAATGGCTGATAGAGCCAGGTTGGCGAAGATACACCAGCCTGATGTGGTGCTTAAGTGTCCACGGTGCGAATCCACAAACACCAAGTTCTGCTACTACAACAACTATAGTCTCTCACAGCCACGCCACTTCTGTAAGACCTGCCGCCGATACTGGACAAGAGGGGGTGCTCTAAGAAACGTGCCTGTTGGTGGTGGTTGCAGAAGGAACAAAAGAAGCAAAGGAACAAGTAGTGCAAGATCGAAGTCTCCTATGAAACCTGATCATCGCCATGGCTCTAGCTCGGCAAGTGCAAACTCTTCTTCAAGTGGATGCATCAATAACAATGACTTGATGGGTCATTTGCAAACTCCATCACCAACCCAACTGCCATTCTTGCCCGCTTTGCATCACTATAGTAGTGATGCATCACTACTTTCTGGTGGCACTGGCTTGCATTTTGCAGCAATTCCATCGTCTTTGGTGGTTAGAAATGGCAATAATACTAGTGGTGCTGAGTTTCAAATTGGCACAAATGGTGGTTCTGTATTGTCACATAATGGCCTTGCTGCACAATGGAGGTTGCCTAATGTGCAACAAATTCATCAGCAGAGTCAACAGTTCCCTAATTTCTTGACTAATTTGGATCCACAAGTTGGGGTTTTTCAGTTTGGTCATGGCGAAAATAATGCTGAGTATGTAAGGGATCATGGAGGAAGGTTTCGTTCTAATAATAACAAGGCATCAATGGATGATTCTAGTGTTGGTGGAATAATGCCTCAGGTTAACACGGTGAAAATGGAAGAGAATAACCAAGGGTTGAGTTTGTCTAAAAATGTTTTTGGTAGTGGTAGTTCAGGAAATGATCTATTTTGGAGTAATGGCAGTGGCAATGCATGGAATGAAGTTCCTAGTTTCACTTCATCAACAAGCCACTTGGTGTAA 1104 0.4511 MVFPSLPLYLDPPNWSQQQPNQQEGIGTQNPLISPPLQPPPPTIAVVVGGGGYQGSIRPGSMADRARLAKIHQPDVVLKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGTSSARSKSPMKPDHRHGSSSASANSSSSGCINNNDLMGHLQTPSPTQLPFLPALHHYSSDASLLSGGTGLHFAAIPSSLVVRNGNNTSGAEFQIGTNGGSVLSHNGLAAQWRLPNVQQIHQQSQQFPNFLTNLDPQVGVFQFGHGENNAEYVRDHGGRFRSNNNKASMDDSSVGGIMPQVNTVKMEENNQGLSLSKNVFGSGSSGNDLFWSNGSGNAWNEVPSFTSSTSHLV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0446 367 MobiDBLite consensus disorder prediction 150 178 - -
Dod01g0446 367 MobiDBLite consensus disorder prediction 11 30 - -
Dod01g0446 367 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 364 IPR045174 GO:0003700|GO:0006355
Dod01g0446 367 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Dod01g0446 367 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Dod01g0446 367 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Dod01g0446 367 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 10 364 - -
Dod01g0446 367 MobiDBLite consensus disorder prediction 122 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0446 Dod-Chr1 7952811 7954975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0446 1 134 C2C2-Dof Transcription Factor Family AT2G37590 58.621 3.02e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod01g0446 zf-Dof 8.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0446 - - gmx:100787357 456.832