Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0449 ATGCAGGAAAGTAGAGATCCTGCAATTAGGCTCTTCGGCCAGAAGATTCCCTTGCCCGGTGAAGGCGAGCTTCCTACCTTTGCTTTTACCGCCGCCAACGACGACAACGATGACTCTGTATCGCCGGTGTACATGGAAGTGGACAGACAAGAAGAAAGGGACGGTGATGATGGAGAATTACAGAATTCAGAAGACGAGAAGGACGAAGAAGACAAGGATCCTTCAGCTGGAAACGCTACTGACAAAAAGGAGGCCGATTATCCTCCGAACGCAGAAGAAACTAAGACTTCAGACACATTGGCGGAGGCTAGTGTGAACCCAAAAACACCATCCATAGATGAAGAGGTTGCAAAATCGAAGAGTGACAACTCAGAGAAGGAGAAAAGCGACGCAACCAACACACAAGAGAAAACCCTGAAGAAACCTGACAAAATACTTCCATGTCCTCGCTGCAACAGCATGGACACCAAATTCTGTTACTACAATAACTACAACATCAATCAGCCTCGCTATTTCTGCAAAGCCTGCCAAAGATACTGGACTGCAGGTGGTACCATGAGGAATGTACCCGTAGGAGCAGGGCGGCGAAAGAACAAGAATTCTGCCTCACACTATCGCCACATCAGCATTTCTGAGGCTCTACAAGCAGCTAGAATTGATGCTCCAAATGGGACTCATCTTCCCGCATTTAAGGGCAACGGTAAAGTCCTCAGTTTCGGATTAGATGCACCTATCTGTGATTCTATGGCATCTGTCCTGAATCTTGCAGAGAAAAAGGTCTTAAATGGTGTGCGAAATGGGTTTCATAGCAAAAGTGGTGAAAATGGTGGGGATGACTGCTCAAGTGCATCTTCCATTACAGTTTCCAATTCTATGGAAGAAAGTGGGAAAAGTGTTTCCCAAGAATCACTGCTCAGAAACAATGGTTTTTCTCCTCAAATTCCATGTCTTCCTGGGGTTCCTTGGCCTTATCCCTGGAGTACTCCAGTTGCTTCACCTCCTTTATGTCCTCCAGGATTTCCCTTGTCATTTTATCCTGCAGCTTTTTGGAACTGTGGTGTGCCAGGAAATTGGAATATACCCTGGTATCCTCCACACCCTTCTGCTCAAACACCGAAATCTCCAATACTAGGGAAGCACTCGAGGGATGGTGACGTGATCAGACCAGACTTCAAAGAAGAACCATCAAAACAGAGAAATGGGTGTGTTTTGGTTCCCAAAACCTTAAGAATTGATGATCCAAGTGAAGCTGCAAAGAGTTCCATATGGGCTACTCTAGGAATCAAGAATGAATCAGCCAGTGGAGGAGGTATGTTTAAGGCCTTCCAATCAAAGAAGGAGGAGAAGAATCATGTTGTTGAAACCTCTCCCTTGTTGCGGGCTAACCCTGCAGCCTTGTCTAGATCCCTTAACTTCCATGAGAACTCCTGA 1431 0.4605 MQESRDPAIRLFGQKIPLPGEGELPTFAFTAANDDNDDSVSPVYMEVDRQEERDGDDGELQNSEDEKDEEDKDPSAGNATDKKEADYPPNAEETKTSDTLAEASVNPKTPSIDEEVAKSKSDNSEKEKSDATNTQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHISISEALQAARIDAPNGTHLPAFKGNGKVLSFGLDAPICDSMASVLNLAEKKVLNGVRNGFHSKSGENGGDDCSSASSITVSNSMEESGKSVSQESLLRNNGFSPQIPCLPGVPWPYPWSTPVASPPLCPPGFPLSFYPAAFWNCGVPGNWNIPWYPPHPSAQTPKSPILGKHSRDGDVIRPDFKEEPSKQRNGCVLVPKTLRIDDPSEAAKSSIWATLGIKNESASGGGMFKAFQSKKEEKNHVVETSPLLRANPAALSRSLNFHENS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0449 476 MobiDBLite consensus disorder prediction 275 303 - -
Dere14g0449 476 MobiDBLite consensus disorder prediction 57 71 - -
Dere14g0449 476 ProSiteProfiles Zinc finger Dof-type profile. 146 200 IPR003851 GO:0003677|GO:0006355
Dere14g0449 476 PANTHER CYCLIC DOF FACTOR 2 1 476 IPR045174 GO:0003700|GO:0006355
Dere14g0449 476 MobiDBLite consensus disorder prediction 1 144 - -
Dere14g0449 476 MobiDBLite consensus disorder prediction 271 303 - -
Dere14g0449 476 Pfam Dof domain, zinc finger 143 200 IPR003851 GO:0003677|GO:0006355
Dere14g0449 476 ProSitePatterns Zinc finger Dof-type signature. 148 184 IPR003851 GO:0003677|GO:0006355
Dere14g0449 476 MobiDBLite consensus disorder prediction 113 144 - -
Dere14g0449 476 MobiDBLite consensus disorder prediction 42 56 - -
Dere14g0449 476 MobiDBLite consensus disorder prediction 92 106 - -
Dere14g0449 476 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0449 Dere-ChrDere14 4640529 4643111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0449 1 474 C2C2-Dof Transcription Factor Family AT3G47500 47.421 1.11e-123 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere14g0449 zf-Dof 2.5e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0932 03 14252726 14254826 Dere14g0449 14 4640529 4643111 ECH
Dere14g0449 14 4640529 4643111 Dere14g0449 14 4640529 4643111 ECH