Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0353 ATGCAGGAAATACATTCTGTCGGAGGAGGTAGATTTTTCGACGGCGGTGGCGGCGGAAGCGGCGGAGGAGACAGGAGGCTAAGGCCACACCACCACCAGAACCAGCAGGCCTTGAAGTGCCCGAGGTGCGACTCCCTCAACACCAAGTTCTGCTACTACAACAATTACAACCTCTCTCAGCCACGCCATTTCTGCAAGAGCTGCCGACGATACTGGACCAAAGGCGGCGTCCTCCGCAACGTTCCCGTCGGTGGCGGATGCCGCAAATCCAAGCGCTCCAAGCCCAAAACCTCTTCCTCATCAGAACCTTCTCCCACGCCTGCACAAGCCCCGGCGCCGCCACCCTCGCAACCGCCGCCTCAAGATCAACATAAGTCCAACTCTCATTCCAGTAGCGAAAGCTCCAGTCTCACCGCTGCTGCCACTGAAGCTGCATCGGCGCCTTCGTCATCAAACTGTGAGTTGTTCACCAATCAGAGTTTGAACCCTAATTTCGAATCGGGGGTGCTGGAGCAAGGGGGGGATTGTGGTATCTTCTCGGAGATTGGGAGCTTAACGAACCTGATTACCACGACGAACGAGGCATTGTCGTTTGGGTTCGGGAATATTCCTGAGGCGGCGTCGTTTCGGTTTGGTAGTACTACTCAACAACAGGGGGGTATGGGGAACGAGTTATTATCGGGTGAGTGGCAGGCCGAGCAGAAGGGGATGGGGATGGGGATGAATGATATGATTTCTCAGCAGGAGTTGAAGTTGCCGGAGATCATGCCAGGGTCGTCGTTGCTTGATCAGACGGTGCCGGTTGATTTGTCGGCGTTGCAGAGTAAAAACGAGAATGGAGGTTTCGGATCGTTGGATTGGCAAGGAAGCACGGATCAAGGTTTGTTTGATCTTCCTAACACCGTAGATCATGCTTACTGGAGTCACACTCACTGGACTGATCAGGAGAATCCTAGTCTCTTTCATCTTCCATGA 975 0.5405 MQEIHSVGGGRFFDGGGGGSGGGDRRLRPHHHQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSKPKTSSSSEPSPTPAQAPAPPPSQPPPQDQHKSNSHSSSESSSLTAAATEAASAPSSSNCELFTNQSLNPNFESGVLEQGGDCGIFSEIGSLTNLITTTNEALSFGFGNIPEAASFRFGSTTQQQGGMGNELLSGEWQAEQKGMGMGMNDMISQQELKLPEIMPGSSLLDQTVPVDLSALQSKNENGGFGSLDWQGSTDQGLFDLPNTVDHAYWSHTHWTDQENPSLFHLP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0353 324 MobiDBLite consensus disorder prediction 1 37 - -
Dere14g0353 324 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
Dere14g0353 324 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Dere14g0353 324 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 31 214 IPR045174 GO:0003700|GO:0006355
Dere14g0353 324 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Dere14g0353 324 MobiDBLite consensus disorder prediction 122 144 - -
Dere14g0353 324 MobiDBLite consensus disorder prediction 106 121 - -
Dere14g0353 324 MobiDBLite consensus disorder prediction 82 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0353 Dere-ChrDere14 3625588 3626562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0353 24 321 C2C2-Dof Transcription Factor Family AT5G60850 40.125 1.08e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere14g0353 zf-Dof 2.5e-33 No_clan