Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1179 ATGGAAGGGAATATAGCTCCAAATAATAATTCATGCACAAAATCAATAGGGTTAGAGAAGAAGACAAGGCCACAAGAGCAACTGAATTGCCCAAGGTGCAATTCCACGAACACCAAGTTCTGCTATTACAACAACTATAGCCTCACACAACCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACTGAAGGTGGGTCCCTCAGAAATGTCCCAGTTGGAGGAGGTTCTAGAAAGAACAAGAAGCTTTCTTCTTCTTCTTCATCTTCATCATCCTCAAAGGTTCTTCCTGACTTGAATCCACCAATAACTGCTATTCATTCTTCTTCTTCTCAAAACCCTAAAATACTAATGCAAGGAGGCCAAGATCTTAATCTGGCTTTCCCACCTATTATGGAGAAGTATGATCATCATGGGATCAGTTACCAAAGCTCTTCTTCTTCTTCATCTTCTTCTTCTGCTTTGGAGCTTCTAAGGGCAGGCATAGCTTCAAGGGGTTTGAATAATCATCCATTTGCTCAGAATCCAATATTGATGCCAAACTCAAATAATACACTTTTCCCATCTGGATTTCCCCCCATGCAAGAGGTTAAGCCAAGCCTTGGGTTTTCAGTTGATGATCATGGTCTTGGAAGTGGATATGATGTTCAAGAGAATAATATAAATGCCGGAAGACTATTGTTTCCTTTTGCAGATGTGAAGCAGATTCCAGGTACACATGGAGTGGAACAAAATAAAGAACAAGGGAATTCATCTACAGGGTATTGGACTGGAATGATTGGTGAAGGATCCTGGTAA 798 0.4085 MEGNIAPNNNSCTKSIGLEKKTRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLSSSSSSSSSSKVLPDLNPPITAIHSSSSQNPKILMQGGQDLNLAFPPIMEKYDHHGISYQSSSSSSSSSSALELLRAGIASRGLNNHPFAQNPILMPNSNNTLFPSGFPPMQEVKPSLGFSVDDHGLGSGYDVQENNINAGRLLFPFADVKQIPGTHGVEQNKEQGNSSTGYWTGMIGEGSW 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1179 265 MobiDBLite consensus disorder prediction 241 259 - -
Dere12g1179 265 MobiDBLite consensus disorder prediction 79 116 - -
Dere12g1179 265 MobiDBLite consensus disorder prediction 69 116 - -
Dere12g1179 265 MobiDBLite consensus disorder prediction 241 265 - -
Dere12g1179 265 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Dere12g1179 265 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Dere12g1179 265 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 157 IPR045174 GO:0003700|GO:0006355
Dere12g1179 265 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1179 Dere-ChrDere12 22550345 22551142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1179 20 265 C2C2-Dof Transcription Factor Family AT3G61850 51.087 2.20e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere12g1179 zf-Dof 2.1e-33 No_clan