Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0577 ATGATGGATGGTGAAAGAGTGACAGTAAGTCATTTTTCTGGAAAAAAACATGGTCCTCCGTTTGAAGTACATGTTCTTGTTGTGGATGACGACGCTACAACGCTTCAGATCACATTGGGAATTCTTACTTCACTGAATTATGGAGCTGAAGGCATTAACCACACATTGCTTGCCTTGGAAAGGCTTAAAGAGAAAGAAGGCAGTTTCGACCTCATTGTTATGGACCTTCATTTGCCACCTATTGATGGATTCAAATTCAAACAAACACTTGATCAACAATTCCCATTATTACCATTAATAATGATTTCAGTGGACAACAAGGAGGGAGTGATGGAGAAAGCCCTAATGAGTGGTGTGGTGCGTTACATAGTGAAACCAGCAACACCAAATGACTTCGAAGGTATTTGGCAATTTGCAAAATCTGCAATCAAAGGCAAGAAGTCTTCATCATCATCACTTGCAGGTTCAGTCATAAGAAGATCAGAACAAGAAGAAGATATTAGTGTTGAAGATTTATGGGAAGCTCAGAGCAATATTAATATTACAAAACATCATGGAGAAGATAAAATGATTAAACGAAAGGACTATGTGGTGAGGGCTCCTTGGAAGGATAATAATAATAATAAAGCCTCATCATCTTCTAGTAGTCTTACTAAGAAGACCAAGGTTGTTTGGACTAATGATCTTCAGAATCGTTTCTTGGAGGCCATAAATATCATTGGCTTGGAAAACAAGGACGTGCTCTTAACAAGTCTGGCATCAAAGTACCCTTCATTGATGCTGAAGAACATTCAAGAGGAGTATCGAAGAATCATAAAGCACAGCAAAATGCAGAGAACTACTTCAAATACTTCGTCCTACAATCTAAAACCTTCTCACTCATGCTACGAGCCCTCAAAGTTGCGACATAGATATAATCCCTCTATATCTCATCGTCCTCATTATTTCTCCTCCAAAACGAACCCTATCTTTCCTTCAAGCAAAACCACACCAACCTACCCTTATGGATCAGTGAATTATAGCATGCCTGCAAGTGCAAGTACTTCAAGTTTCTCCAGCTTCAACAATAATAATGCTAGATCAGTAATTGGTGAGTTAACAAGTACTTTTGAGGAAATGAATCAGATTCAGCGTACTGTAAATAATGGGGTTTCAATTTCAAATACTTTTGAATGTGGGTATAATGATAATTCCTTGATCAATGATTGGAATTATAGTTATTTGAATATTGAGGGAGGGTTATGTCCTACTAGGGCAAACCAGACTTTAGAGAAGTGCATGGAAGGGAATAATGCTATGGAGCATATTCTGGAGAAACCCTTGTATGAGCAGCAAGAAGTACAACAGCAAAACCAGTTTTCCAATGAAGAAGATGATTGTTATGGAGCTTCTGAAATTGGAAATTACAATGATGCCTCACATGTAACATCTCAGTACAGCTTAAGCTTCTATGGAATAATTGATGAGTGTCGTGATAACTTCAATGAAGGCGATAATAGCAAATTCTGTACTCAGCATGAAAACAAAGAAGAAAGTTCAAAAGAAGGTACTAATTATCCTACAGATTTTATGGCGGAAGTCACTACGGCTAACGGCGATGCTTCCAAACAGACTGTGAAGGAAAAGATTCAAGATATGAACGCCATGCGAAAGGCCAAGGCCGAAGCAAAGGCTGAAGAAAAGGCCGAGAAGGAAGTAGCAAAAGCAAGAATGGAGATAGCACACGAGGTAAGGTTGGCAAAAGAGAAAGAAGCCCAAATGGAGCTGCATGTGGCCAAGGCTGGACGTAGGGCAGAGAAAGAAATGGCAAAGCATGGAGTCAAGAACCCTACTCCTGCCATGGCAGGTGATAACGCAAATCACCCTGCTTACACTACTCACTGA 1884 0.396 MMDGERVTVSHFSGKKHGPPFEVHVLVVDDDATTLQITLGILTSLNYGAEGINHTLLALERLKEKEGSFDLIVMDLHLPPIDGFKFKQTLDQQFPLLPLIMISVDNKEGVMEKALMSGVVRYIVKPATPNDFEGIWQFAKSAIKGKKSSSSSLAGSVIRRSEQEEDISVEDLWEAQSNINITKHHGEDKMIKRKDYVVRAPWKDNNNNKASSSSSSLTKKTKVVWTNDLQNRFLEAINIIGLENKDVLLTSLASKYPSLMLKNIQEEYRRIIKHSKMQRTTSNTSSYNLKPSHSCYEPSKLRHRYNPSISHRPHYFSSKTNPIFPSSKTTPTYPYGSVNYSMPASASTSSFSSFNNNNARSVIGELTSTFEEMNQIQRTVNNGVSISNTFECGYNDNSLINDWNYSYLNIEGGLCPTRANQTLEKCMEGNNAMEHILEKPLYEQQEVQQQNQFSNEEDDCYGASEIGNYNDASHVTSQYSLSFYGIIDECRDNFNEGDNSKFCTQHENKEESSKEGTNYPTDFMAEVTTANGDASKQTVKEKIQDMNAMRKAKAEAKAEEKAEKEVAKARMEIAHEVRLAKEKEAQMELHVAKAGRRAEKEMAKHGVKNPTPAMAGDNANHPAYTTH 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0577 627 Pfam Late embryogenesis abundant (LEA) group 1 537 601 IPR005513 GO:0009793
Dere12g0577 627 Coils Coil 539 572 - -
Dere12g0577 627 MobiDBLite consensus disorder prediction 592 627 - -
Dere12g0577 627 MobiDBLite consensus disorder prediction 592 606 - -
Dere12g0577 627 ProSiteProfiles Response regulatory domain profile. 24 140 IPR001789 GO:0000160
Dere12g0577 627 SUPERFAMILY CheY-like 24 140 IPR011006 -
Dere12g0577 627 SMART REC_2 23 136 IPR001789 GO:0000160
Dere12g0577 627 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 350 IPR045279 GO:0009736
Dere12g0577 627 Pfam Response regulator receiver domain 25 131 IPR001789 GO:0000160
Dere12g0577 627 Gene3D - 23 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0577 Dere-ChrDere12 9835589 9848605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0577 20 243 Response Regulator Gene Family AT4G16110 30.357 4.46e-22 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere12g0577 Response_reg 5.9e-17 CL0304