Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0863 ATGCACACACGCAAGGATAAAAAGCCCTCAATCATAACCACAAAAAGCCTCCTTCTTCCAATCCCCACTTTCTCAATTGAAAGCGCAGGGTCTCTACAGCTTTCCTTCTCTTCGTTCCTCTCAAGCCTTCGTTTAGCTATGAGAGTTCCCGTTTCATCGTCCCCACAGACCCACCAATTATCGAACCCAAAACCCACTGTCTCTGCCACCAACACAGCCCGAAACCTTTCCAGCATCAACCCTGCAGGATCCTGCTACGAACCCACTTCTGTTCTCGACCTCTGCCGGAGTCCCAGCCCCGGGACCGTTCCTGAAAAACCCACCAACCGCTCCGCCGCAACCGAGTCCCTGTCGAAGCCTGAAGACGCTCTGGAGTGGGACGAGCATGTGCTGCATGGTCTGGATTGGGATTCCATCATGAAGGACTTGGGTTTGCACGATGACTCCGTCGCCACCGTTTTCAAGACTACCGGTGCCCAATCCAGCCCATCTGAGCCTCAGGTCCCACAACTCCCTGAATTCCCGAATTCTCAAGAGTCACCTTTCGATCACGCTCCAGATTTCAGTCTCTCGGTCTCGGATGTTAATTACATGAATCAAAACATGGGTTACAATTATAGTAACTCTTTTGATCATTTGGTTCATGAGTTCAATCATAACGGCAATTGGCATAACACCGGGTTCGATTTCATCGAAGAGCTTATTCGTGCAGCCGATTGCTTCGACACGAACCAGCTACAACTCGCCCAGGTGATATTGGAGCGGCTAAATCAACGCCTACGATCCCCCGTCGGAAAACCTCTTCAGAGGGCCGCGTTTTATTTCAAAGACGCTCTCCAGTCTCTTCTCTCCGGTTCGAACCGGACCCCACGCCTTTCTTCCTTGGTGGAAATCGTTCAAAGTATCAGAACTTTCAAGGCCTTCTCCGGAATTTCTCCAATTCCCATGTTCTCCATCTTCACCACTAACCAAGCACTCCTCGAAGCCCTTCATGAATCATCCTTTATGCACGTCATCGACTTCGACATCAGCTTAGGTATTCAATACGCTTCTCTGATAAAAGAGATTGCCGAGAAGGCAGAGTCGTGTAAAATCAACTCGCCCGTCCTTCGAATAACCGCCATCGTTCCGGAAGAATACGCCGTGGAAAGCAGATTGATCCGAGAAAACCTGAACCAGTTCGCCCACGAACTCAGAATCCGAGTCCAAATCGACTTCGTTCCGTTGCGAACCTTCGAGACGTTGTCGTTGAAGGCCGTCAAGTTTATGGACGGAGAGAAGACCGCCGTTCTGCTATCCCCAACAATCTTCCGCCGTCTCGGATCAGCAAAAAACATCACCGCATTTCTAGGGGATATTAGGAGGGTTTCGCCTAGTGTGGTGGTTTTCGTAGACAGCGAAGGGTGGACAGACGCCGCCGCTGCGACGTCGTTTCGTCGGAGCGTGGTGAACAGCCTGGAATTCTACTCGATGATGTTGGAGTCGTTGGATGCATCAGTAGTGGGTAGTAGAGGTGGAGAATGGGTCAAAAGAATCGAGATGTTTCTGCTGCGACCGAAGATATTGGCGGCGGTGGAAGGCGGAGGACGGCTGGTTCCGGCGTGGAGGGAGCTGTTTTACGGGGCGGGAATGAGGGCGGCGCAGTTAAGCCAGTTCGCGGATTTTCAAGCCGAGTGCTTGTTAGCCAAAGTGCAGATTAAGGGGTTCCAGGTGGCAAAACGACAGGCAGAATTGGTGCTCTTCTGGAATGAGCGGGCCATAGTTTCCACGTCAGCATGGCGATGTTAG 1788 0.5151 MHTRKDKKPSIITTKSLLLPIPTFSIESAGSLQLSFSSFLSSLRLAMRVPVSSSPQTHQLSNPKPTVSATNTARNLSSINPAGSCYEPTSVLDLCRSPSPGTVPEKPTNRSAATESLSKPEDALEWDEHVLHGLDWDSIMKDLGLHDDSVATVFKTTGAQSSPSEPQVPQLPEFPNSQESPFDHAPDFSLSVSDVNYMNQNMGYNYSNSFDHLVHEFNHNGNWHNTGFDFIEELIRAADCFDTNQLQLAQVILERLNQRLRSPVGKPLQRAAFYFKDALQSLLSGSNRTPRLSSLVEIVQSIRTFKAFSGISPIPMFSIFTTNQALLEALHESSFMHVIDFDISLGIQYASLIKEIAEKAESCKINSPVLRITAIVPEEYAVESRLIRENLNQFAHELRIRVQIDFVPLRTFETLSLKAVKFMDGEKTAVLLSPTIFRRLGSAKNITAFLGDIRRVSPSVVVFVDSEGWTDAAAATSFRRSVVNSLEFYSMMLESLDASVVGSRGGEWVKRIEMFLLRPKILAAVEGGGRLVPAWRELFYGAGMRAAQLSQFADFQAECLLAKVQIKGFQVAKRQAELVLFWNERAIVSTSAWRC 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0863 595 ProSiteProfiles GRAS family profile. 221 594 IPR005202 -
Dere09g0863 595 MobiDBLite consensus disorder prediction 157 177 - -
Dere09g0863 595 MobiDBLite consensus disorder prediction 157 183 - -
Dere09g0863 595 Pfam GRAS domain family 231 594 IPR005202 -
Dere09g0863 595 MobiDBLite consensus disorder prediction 96 121 - -
Dere09g0863 595 MobiDBLite consensus disorder prediction 53 81 - -
Dere09g0863 595 MobiDBLite consensus disorder prediction 102 116 - -
Dere09g0863 595 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 199 587 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0863 Dere-ChrDere09 11504695 11506482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0863 124 594 GRAS Transcription Factor Family AT4G36710 54.806 1.95e-166 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere09g0863 GRAS 1.6e-85 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0863 09 11504695 11506482 Dere09g0863 09 11504695 11506482 ECH