Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0794 ATGAGGAGTGCCCCACAATGCAGAGGGCAAAGGGGCCTTGACGGCGACTATAGTATGTGCCCGCACTGCCCGCGTTGCCCGACAAGTGTATCAGGGGCAGATAGTGTTGTCGTCTTTAGCCAAAGCTGGTGTCGTTTTCTGAAGGCGGGCGAATGCGAATTTGAGGGGCTAAAGGGCGTGTTTGGTCCCTGTGATCTGATCAAATTCTCTCGCCCCGGACATCACGCGCGCCCATTATCCACAAAGATCATAAAGAAGATGATTCAGGAACTGTTGGGCGGTGCTGGCCTCATAGCAGGCGAAAGGAAAATCTCCATTAACGGAGTAGCAGGAGTTTTACCACCTATCACCTCATCTCCAAATTCTCTCCCTTCTTCTCCACCTCCTTCTTCCACCACCACCACCACCACCACTACTTCTACTGCCACTGCTGCTGCAACTGCCACCTCAACAAATTTGGAGAACCAAAATTTGAGGTGCCCGCGGTGTGATTCTTCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGCGGTGCCCTCAGGAACGTTCCAATCGGAGGTGGTTGCCGGAAGAACAGGAACGTTGGTGCGTCCAACTCCGTGGCGAAGACGAGCGCGGCCAAAATGAAAACCGTTGCAGCGACGGAGCTTGAAAGGTCGGTGCTTGGGGTGGCCGGGTTCATCGACCATGACCTTACGTCGAGCACAATTCTTTGGGGCTCGCCGCAAAATTCTCATCTGTTAGCTTTGCTGAGAGCTAGCCAAAACCAAAACCCTAACCCTAGCCCTAGTCTTCCCATGTCCGTTAATGCTGTTAAGGCAGAAGGGAACTTAGTGGGGTCTCACACGGTGACTGAGCCAATGGTCGGAAATGGTTTAGCAAATGGTCGAGCCCTAGGCTTTGATTCTGTAGGGCAATTTCCTACACTTGGGATGTGCAGCTCCATATGGAGAAACAATAATAACAATAATAATCAGGAGGGGTTTTTAGTTGGAGAGCATGAGAGCAGTGGAATTCAAGAACTGTACCAGAGGCTGAGGTCATCACCAGCAGCTAATTATTGTAGCGACAACAACTCACCACAAGTGTTTCTGGGAAACATGGCTTCTTCTTCCTCCTCGTCTTCTTCTCTATCCATTTTGGACTCAGCTCCAGTAGTTGCTGGGAATGATCAATTGGGGTACACCTGGAATCCAACCCTTTCGTGGTCTGATCTTTCCACCACCAATGGTACTGCATATCCTTAA 1302 0.5054 MRSAPQCRGQRGLDGDYSMCPHCPRCPTSVSGADSVVVFSQSWCRFLKAGECEFEGLKGVFGPCDLIKFSRPGHHARPLSTKIIKKMIQELLGGAGLIAGERKISINGVAGVLPPITSSPNSLPSSPPPSSTTTTTTTTSTATAAATATSTNLENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRNVGASNSVAKTSAAKMKTVAATELERSVLGVAGFIDHDLTSSTILWGSPQNSHLLALLRASQNQNPNPSPSLPMSVNAVKAEGNLVGSHTVTEPMVGNGLANGRALGFDSVGQFPTLGMCSSIWRNNNNNNNQEGFLVGEHESSGIQELYQRLRSSPAANYCSDNNSPQVFLGNMASSSSSSSSLSILDSAPVVAGNDQLGYTWNPTLSWSDLSTTNGTAYP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0794 433 Pfam Dof domain, zinc finger 156 212 IPR003851 GO:0003677|GO:0006355
Dere09g0794 433 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 146 339 IPR045174 GO:0003700|GO:0006355
Dere09g0794 433 ProSiteProfiles Zinc finger Dof-type profile. 158 212 IPR003851 GO:0003677|GO:0006355
Dere09g0794 433 ProSitePatterns Zinc finger Dof-type signature. 160 196 IPR003851 GO:0003677|GO:0006355
Dere09g0794 433 MobiDBLite consensus disorder prediction 117 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0794 Dere-ChrDere09 10846776 10851187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0794 72 219 C2C2-Dof Transcription Factor Family AT1G07640 43.919 1.22e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere09g0794 zf-Dof 1.3e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0794 09 10846776 10851187 Dere09g0794 09 10846776 10851187 ECH