Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0832 ATGGTCTTCCCTTCCCTCCCAGTCTTTCATCTAGATCCACCCCACTGGGCTCAACAGCAACAAGATCAGCAGGGAGGAGGAGGAGTGATTCCTAATCCTCCTGCCCAGCATTCCTGGGTTCCACCGCCTTCGCCGCCGCCGCCAACGGTTGCTTCTGCGACTGGCGGTGGCGGTGGCGGTGGCTCGAGGCCGGGGCCGATGGCTGATCGAGCTCGGCTGGCGAAAATGGCGCAACCAGAAGCAGCACTGAAATGCCCACGGTGCGAATCAACGAACACCAAGTTCTGCTACTACAACAATTACAGCCTCTCGCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGGTACTGGACCAGAGGGGGGGCGCTGCGAAACGTGCCGGTCGGAGGCGGGTGCCGGAGGAAGAACAAAAGAACCAAAGGAGGTAACAACAGATCAAAATCTCCCACCAAAGCAATAACATCTTCATCAGCTTCCATTTCCAACTCTGCAAGTAGCTTCTGCCCTAGAAGTGATCATCATCAAATACGTCACTTTCCATCTCAGTTTCTCTTCCCCACTACTACTTCTCGTAGTTACAGTGTCTACGACGTCGTTTCTGGGACAACAAATAGTGAAGTTGTTGATTGTCAAATTGGTAACAATAACAATAATACTTCTGAGCAGTGGAAGCTTCCATGCCTGCAAAATCTTCAACAGGTCCCAGAAACATTCTTGACTAATTTGGAAGCACCAATTGGGTTATATCAGTTTGAAAGATCGGAGAATGTTGAAGTTGAACCCTCAAGAGCAGTATTGTATTCTTATGGTAGCGGAATAAGTCCTTATCATCATCAGCTTGCTACTACAGTTAAAATGGACGAAAATGTTCTTCAGAATAATGTACATTTCTGGGATCATAGCAACACATGGAACAACAATAATATTTATAGTTTCGCTTCTTCTTCCACCACCCATTTGTGA 963 0.4839 MVFPSLPVFHLDPPHWAQQQQDQQGGGGVIPNPPAQHSWVPPPSPPPPTVASATGGGGGGGSRPGPMADRARLAKMAQPEAALKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRKNKRTKGGNNRSKSPTKAITSSSASISNSASSFCPRSDHHQIRHFPSQFLFPTTTSRSYSVYDVVSGTTNSEVVDCQIGNNNNNTSEQWKLPCLQNLQQVPETFLTNLEAPIGLYQFERSENVEVEPSRAVLYSYGSGISPYHHQLATTVKMDENVLQNNVHFWDHSNTWNNNNIYSFASSSTTHL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0832 320 MobiDBLite consensus disorder prediction 35 50 - -
Dere06g0832 320 MobiDBLite consensus disorder prediction 128 158 - -
Dere06g0832 320 Pfam Dof domain, zinc finger 82 137 IPR003851 GO:0003677|GO:0006355
Dere06g0832 320 ProSiteProfiles Zinc finger Dof-type profile. 83 137 IPR003851 GO:0003677|GO:0006355
Dere06g0832 320 ProSitePatterns Zinc finger Dof-type signature. 85 121 IPR003851 GO:0003677|GO:0006355
Dere06g0832 320 MobiDBLite consensus disorder prediction 16 68 - -
Dere06g0832 320 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 71 232 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0832 Dere-ChrDere06 14512948 14514050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0832 63 140 C2C2-Dof Transcription Factor Family AT2G37590 85.897 2.95e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere06g0832 zf-Dof 3.2e-32 No_clan