LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere05g2630	ATGGAGGCGAATCGAGCAGGGAGTAGTACTTGTAGGCCTCAACAGAGCATGGGGTTTCCACCGCCACAGAGGAATGAACCCCTGCCATGTCCACGCTGTGATTCCAGAGCTACCAAGTTCTGCTACTACAACAACTACAACCTTTCGCAGCCACGTTACTTGTGCAAGTCTTGCCGTCGATACTGGACCCACGGCGGCACCCTCCGCAACGTTCCCGTCGGTGGTGCCACTCGCAAGATTTCTAAGAAGTCGCGCACTGCTTCTTCTTGCTCTGTTCCATCGACCAGCACTGCACTGCCTACATCATCGGCCAATCCTCAAAGCCATATGAACTCTCCTCCTTTGTTGACGCTCAACTCGGAGGCCAGTTTGGGATTAAGTGGGTTTTCATATGACTTCACGCCTGATTTCGACCATGCAGGGGTTGGGGATTTTCCGGAGTTCAGTGCTCTACCTTCTGATTGCAGCGCATGGGACGGCCTTGCTTTGCCAGACCACCCTCCCAACAACCTCAACTAG	519	0.5376	MEANRAGSSTCRPQQSMGFPPPQRNEPLPCPRCDSRATKFCYYNNYNLSQPRYLCKSCRRYWTHGGTLRNVPVGGATRKISKKSRTASSCSVPSTSTALPTSSANPQSHMNSPPLLTLNSEASLGLSGFSYDFTPDFDHAGVGDFPEFSALPSDCSAWDGLALPDHPPNNLN	172

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere05g2630	172	MobiDBLite	consensus disorder prediction	81	112	-	-
	Dere05g2630	172	Pfam	Dof domain, zinc finger	27	82	IPR003851	GO:0003677\|GO:0006355
	Dere05g2630	172	PANTHER	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	16	114	IPR045174	GO:0003700\|GO:0006355
	Dere05g2630	172	MobiDBLite	consensus disorder prediction	77	112	-	-
	Dere05g2630	172	MobiDBLite	consensus disorder prediction	1	28	-	-
	Dere05g2630	172	ProSitePatterns	Zinc finger Dof-type signature.	30	66	IPR003851	GO:0003677\|GO:0006355
	Dere05g2630	172	ProSiteProfiles	Zinc finger Dof-type profile.	28	82	IPR003851	GO:0003677\|GO:0006355
	Dere05g2630	172	MobiDBLite	consensus disorder prediction	1	19	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere05g2630	Dere-ChrDere05	37122530	37123048	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere05g2630	21	130	C2C2-Dof Transcription Factor Family	AT5G66940	54.783	6.98e-34	117

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2C2-Dof	Dere05g2630		zf-Dof	3.6e-32	No_clan