Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2243 ATGTCGTCCAATAGTTCTTTGAATGTGCAGTTGTCGAAGAAGACTTCCTTTTTGGGTTTGAAACTATGGGTTTTAATTGGGATAGGCGTGGGCGCATTTATAGTGCTGATTCTTTGTATATTATCAATATGGGTGATGTTTTGGAGAAAGTCAAGGAGATCCCTGAACGAATGCCCTCCATCCCAAATACCAAATGTCTCGAAAGATATCAAGGTTGATAAGGTTGGACTGCAGAATTCTCATAGTCATCCAGAAAGTGTATATATTCCTTTTCATGACAAGGCAAATGATAAGAATTCAGATAAGGTGTTAGTTCAGTCGGGCATGAGCAAATCCAGTGATCCTGACAATATCAGTCAGTGCAGTTCAATATATCATCATGAGAGAGGAGGTAGTTCAATGTCAGGTGAAGAGGGAAGCTCTGGGACCTATAAGAAGCAGTCCACATTATCATATGGAGGATTGGTGACTGCCTCTCCTTTAATTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCATTGGTTTACGCTTAGGGATCTAGAACTTGCAACAAATCGTTTCTCAGCTGAGAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACAGAGGAAGACTGATAAATGGAACTGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTACGACATAAAAATCTCGTGCGCCTGCTTGGATATTGCATTGAAGGAGTTCACAGGCTGCTTGTGTATGAGTATGTGAACAATGGTAACTTAGAACAGTGGTTACATGGGGCCATGCGCCAACATGGGACTCTTACCTGGGAGGCCCGAATGAAAGTTATACTTGGCACAGCCAAAGCGCTTTCATACTTACATGAAGCAATAGAACCAAAAGTTGTTCATCGAGACATAAAGTCTAGCAATATATTGATTGATGATGAGTTCAATGCAAAAGTGTCTGATTTTGGTTTGGCCAAACTCTTGGGTTCAGGAGAAAGTTACATAACAACTAGAGTCATGGGAACATTCGGTTATGTGGCACCGGAGTATGCTAATACTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTTCTACTTCTGGAAGCCGTTACCGGAAGGGACCCTGTAGACTATGCACGTCCTGCTAATGAGGTTAATCTTGTTGAATGGCTCAAGATTATGGTTGGTGCAAGAAGAGCTGAGGAAGTCTTGGACCCAAACCTTGAAGTTAAACCATCAACACGTGCATTAAAGCGTGCCCTTCTGGTTGCATTAAGGTGTCTTGATCCTGATGCAGAAAAGAGACCCAAAATGAGTCAGGTTGTGAGGATGCTCGAAGCTGATGAATATCCATTCCGAGAGGATCGAAGGAACCGAAAGAGCCGCACTGCTAGCATGGAAATTGAATCTACAAAGGATCTTTCTGGTCGATCCAATGCTGAGAATAAGTCAGGGGATTCTGAAAGTCATATGCCAGAGGCAACTTAA 1530 0.4268 MSSNSSLNVQLSKKTSFLGLKLWVLIGIGVGAFIVLILCILSIWVMFWRKSRRSLNECPPSQIPNVSKDIKVDKVGLQNSHSHPESVYIPFHDKANDKNSDKVLVQSGMSKSSDPDNISQCSSIYHHERGGSSMSGEEGSSGTYKKQSTLSYGGLVTASPLIGLPEFSHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYRGRLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKVILGTAKALSYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESYITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKIMVGARRAEEVLDPNLEVKPSTRALKRALLVALRCLDPDAEKRPKMSQVVRMLEADEYPFREDRRNRKSRTASMEIESTKDLSGRSNAENKSGDSESHMPEAT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2243 509 CDD STKc_IRAK 194 460 - -
Dere04g2243 509 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Dere04g2243 509 Coils Coil 208 228 - -
Dere04g2243 509 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2243 509 Gene3D Transferase(Phosphotransferase) domain 1 264 477 - -
Dere04g2243 509 FunFam Putative receptor-like protein kinase 170 263 - -
Dere04g2243 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Dere04g2243 509 MobiDBLite consensus disorder prediction 482 496 - -
Dere04g2243 509 FunFam Putative receptor-like serine/threonine-protein kinase 264 474 - -
Dere04g2243 509 SUPERFAMILY Protein kinase-like (PK-like) 172 461 IPR011009 -
Dere04g2243 509 PANTHER OS01G0323000 PROTEIN 1 485 - -
Dere04g2243 509 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Dere04g2243 509 MobiDBLite consensus disorder prediction 466 481 - -
Dere04g2243 509 MobiDBLite consensus disorder prediction 466 509 - -
Dere04g2243 509 Pfam Protein kinase domain 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g2243 509 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2243 Dere-ChrDere04 26282083 26285697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2243 165 462 Trihelix Transcription Factor Family AT1G70460 47.525 6.20e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere04g2243 Pkinase 2.2e-49 CL0016