Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0720 ATGGAGCAGAGCGATACAATTTCTGATTCAGCACCGCGGAAATTGGCTCGGCAATTGGATTTCACCGCCACCAGTGGAGGTTTGGCGAACGTGGAATTGCCGAAGGCACCTGAATCTCAGACAGAGTTAGAGCTTCTACCGCAGACGCCGCAATCACTGTCAAAATCGATTTTGCAGCCACAATCACAGTCGTCGTCTCAAATACAGATTGAACCGAAATTGCAGTCGCAAGGATACTCGCCGACACAACTTCAGTTGCCTTTACGATCGCAGGGCCAGCAGCCATGGTCATGTTCGCACACGCAACAGCAGAGAGCATCTCAATCTCAGGTGAAGCAGAAATCGCAAGCGCGGCCACACCTAGTGTCGCCTGTTCGTCGAATTCCGCACCCTGTGCAGAAAGTTCCAATGACGACGTTACAATTGTTGAAGCAAGAGTCTCCTAGATCACGACCTTGGTATAATGTGGAATCAAAGGACAGCACTCCAAAGAAACAAAAGCAGTGCAACTGCAAAAATTCTCGATGCCTCAAATTGTACTGTGAGTGCTTTGCCGCTGGGATCCATTGTGATGGCTGCAACTGCATAAATTGTCACAATAATGTGGATAATGAGGAGGCCAGACAGGAGGCAGTTGGAATTATATTAGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGTAGTCCACATGGACCACGGGATTCCAAGGAAGAGGCTGAAATTCAAGTATTTGGAAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATGTCCTCTGCTCTGAAAATTGTAAATGCATCGATTGCAAGAATTTTGAGGGAAATGAAGAAAGAAGAGCTCTTGATCCTATTCACATCAAACTGGCAGCTAATGCTGGCATCAGTGAAGCAATTGGATCCTCCGGCTATGGGATACATAAAACTCCCAAGAGGAGAAAAATTCAGGAAACATTTTCTGACAATGCAGCCATAGATCAAAGTGTTTCGTCTGCTCAATTTAATCAGGGAAATGATGCAGTAGTTTCTACACCTGCTCTGTCTGTGTCCCTTGTCTCTGACACTGCAAATGCGACAATTCCAGGGTCTTCAAGATCTACATACAGGTCCCCATTGGCGGATGTCCTCCAACCACAGGATGTGAAGTATCTATGTTCACTTTTTGTTGTTCTCTCAGGAGTAGCTGCAAAGACATTTGCAGAGTTAAGAGGCAAAGTAGACCAGGAAATGGAGACCAAGAAATTTGAAAATTCTGTTGCTTCATCAGCTGAATTGCTGCAAGATACTAAACAAGAAGTCCAAGAGCCTGTTTTTGATGGTCATGCGAAGAAGAATGAAGCAGAGAGTGGTGGAATCAGTGATTCTGGATCAGATGGAGTTGATATGCAGGACTATGATAGGCCACTGTCACCAGGAACGCTAGCATTGATGTGTGATGAACAAGATGAGATGTTTTTTTCCTATAGTTCTGCTAATGGAGTGGCTTGCAATGGTCAAAAAGCGATTCCGAAGTCATCCAATTCTGATGGATGCACGGATATTTATGGAGAGCAGGAACGACTTGTGCTCACCAGGTTCTGGGATGTTCTTCGCGGACTCATCATTCGTGGTAGCATAAAAGAAACAATGTGCTCTCCATTAACCAAGAAAGAGGCGGGAAGCAAACAAGAAGCTGGAGAGAATGCCAATGATGGAGCTGAAACTGATTTAAGAAGTGAGAAGGGAAAGGGACTTCACAGGCACAGCAATTGCATTGCGAAGTCCACCATCCCGGTAGCCACTGAAGTATCTGAGACAAGTAGGGCAATGACTAATGGACATGGTAATGATGATTTGTCCTTAAGGATCGGTCTGCCAACTGGAATAGCTGGGCTCACCCGAATTCAGACACAACATCGTATTATAGTTGTAAGGAAAAGAATTATGCAAGCACAAAATTTTGTCAATGTTGTACAAGTCGGATTGTTTCGAAGCACTTTCCTCAAAAAGCACAGAGTCATCCCTCATCGCTGCACACACAGCACAATGGAAGAAGCCTTTGATGCTCTCAAGCTCCGATCCGACTTCCTTCAAGTCCTCCGTAGCAGGCGACCCTCTCAAGTTCCGCCATGTGTGGAACTCGTGAAGCCAGTTGCTAACCCTTTGTATCAAGACGATACTCCACCTTCCTCTGAGGTTCCGACTTTCCCTCGAGATAGCTTCCACATGGCACAAACCAATGTAAAGAATTCTTACGCCCATTACTTAAGAGAGGATATAGACCCTTCTAGAATAGGAATCACTGGAATATCTCTTGGAGCAATGCATTCGTGGTTTGCTGCATTTGCGGACACCCGATACGCAGTGGTAGTCCCAATGATTGGTGTTCAGGGGTTTCGATGGGCGATAGACAATGATAAGTGGCAGGCTCGAGTTAACAGTATAAAGCCTGTGTTTGAGGGACATGTTCATTCTGCTACAAATTCAGTGATCATTGTGTACCAGTGGTGCGGTAAATACATTCCTAATGCTCTTGGCTTAATGCAAGCAGTGGCACGTGATGATTTGGGTAAAAGTGCTATTGATAAAGAAGTAGTGCAGAAGGTGTGGGACCGGATTGCTCCCGGTCTAGCTTCCCAGTTTGATTCACCCTATACAATTCCAGCTATTGCACCACGTCCCCTGCTTATTCTAAATGGTGCCAAAGATCTCCGATGTCCCCTTGAAGGTTTGAAAATTCCAGAGTCAAATGCACGGCAGGCGTATGAAGAATCTCACAGTCTGGACAAGTTTAAGGCATGA 2820 0.4528 MEQSDTISDSAPRKLARQLDFTATSGGLANVELPKAPESQTELELLPQTPQSLSKSILQPQSQSSSQIQIEPKLQSQGYSPTQLQLPLRSQGQQPWSCSHTQQQRASQSQVKQKSQARPHLVSPVRRIPHPVQKVPMTTLQLLKQESPRSRPWYNVESKDSTPKKQKQCNCKNSRCLKLYCECFAAGIHCDGCNCINCHNNVDNEEARQEAVGIILERNPNAFRPKIASSPHGPRDSKEEAEIQVFGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCIDCKNFEGNEERRALDPIHIKLAANAGISEAIGSSGYGIHKTPKRRKIQETFSDNAAIDQSVSSAQFNQGNDAVVSTPALSVSLVSDTANATIPGSSRSTYRSPLADVLQPQDVKYLCSLFVVLSGVAAKTFAELRGKVDQEMETKKFENSVASSAELLQDTKQEVQEPVFDGHAKKNEAESGGISDSGSDGVDMQDYDRPLSPGTLALMCDEQDEMFFSYSSANGVACNGQKAIPKSSNSDGCTDIYGEQERLVLTRFWDVLRGLIIRGSIKETMCSPLTKKEAGSKQEAGENANDGAETDLRSEKGKGLHRHSNCIAKSTIPVATEVSETSRAMTNGHGNDDLSLRIGLPTGIAGLTRIQTQHRIIVVRKRIMQAQNFVNVVQVGLFRSTFLKKHRVIPHRCTHSTMEEAFDALKLRSDFLQVLRSRRPSQVPPCVELVKPVANPLYQDDTPPSSEVPTFPRDSFHMAQTNVKNSYAHYLREDIDPSRIGITGISLGAMHSWFAAFADTRYAVVVPMIGVQGFRWAIDNDKWQARVNSIKPVFEGHVHSATNSVIIVYQWCGKYIPNALGLMQAVARDDLGKSAIDKEVVQKVWDRIAPGLASQFDSPYTIPAIAPRPLLILNGAKDLRCPLEGLKIPESNARQAYEESHSLDKFKA 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0720 939 MobiDBLite consensus disorder prediction 138 157 - -
Dere04g0720 939 MobiDBLite consensus disorder prediction 566 591 - -
Dere04g0720 939 ProSiteProfiles CRC domain profile. 165 288 IPR005172 -
Dere04g0720 939 MobiDBLite consensus disorder prediction 42 69 - -
Dere04g0720 939 Gene3D alpha/beta hydrolase 760 939 IPR029058 -
Dere04g0720 939 SMART CXC_2 248 289 IPR033467 -
Dere04g0720 939 SMART CXC_2 164 204 IPR033467 -
Dere04g0720 939 MobiDBLite consensus disorder prediction 560 591 - -
Dere04g0720 939 MobiDBLite consensus disorder prediction 90 117 - -
Dere04g0720 939 MobiDBLite consensus disorder prediction 35 69 - -
Dere04g0720 939 MobiDBLite consensus disorder prediction 90 168 - -
Dere04g0720 939 MobiDBLite consensus disorder prediction 453 474 - -
Dere04g0720 939 PANTHER TESMIN/TSO1-RELATED 16 551 IPR028307 -
Dere04g0720 939 SUPERFAMILY alpha/beta-Hydrolases 764 916 IPR029058 -
Dere04g0720 939 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 166 201 IPR005172 -
Dere04g0720 939 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 251 285 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0720 Dere-ChrDere04 7255223 7267353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0720 3 562 CPP Transcription Factor Family AT4G29000 45.783 2.88e-132 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Dere04g0720 TCR 2.6e-12 No_clan