Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0783 ATGGATTTTTCTTCTCTGCAGGAGCACGTCTGCATGGAATCATCGGATCATTGGCTACAGGGCACAATTCAGGAGGAATCTGGAATAATGGATTCTTCATCTTCGTCTCCGCCATTAATGGACAGGAGGGTAAGGCCATCCCCGCAGGACCAAGCTTTGAAGTGTCCGAGGTGTGAGTCAACACACACCAAGTTCTGCTACTACAACAACTATAGCCTCTCTCAGCCAAGGTACTTCTGCAAAACTTGCAGAAGGTACTGGACCAAAGGAGGCACTTTGAGAAACATCCCAGTGGGTGGAGGTTGTAGAAAGAACAAGAAAGCGTCATCCAAGAAGTCCAACGACGTCGTTCAGACACAGCCCGAACTCAAAGATCTTCATCTCACAGCTTCTTCTAACTTCCCAGATCATGCTCTGCAATTTTCCCACCCAATGGGACTAATGGCGGAGAATTCTAGGCCAATTGAGTTCATGGAAACTAAGTTTGGAGTAGGTATAAATAATGTTATGGGAAATGTTGGTGATGTGGGTATTAATGCAGATCATACAAATAATTATGGCTACAATAATGGGTTCTTGGCGCCAAATTTCCAGGGTTTTGGGGGTAACATGAGCTACTTTGATGGCTTCAATGGTAGTGGTGGGACTTACAACACAATAGACTCTTCTTTCCGTTTGAATGAGGACCAAAATATTGTTGGGGCAATTCATGATGTGAAGCCAAACCCTAAGCTATTGTCTCTTGAATGGCAAGATCATCATGCTTGTTTTGATGCTGGAAAAGAGCCTCTTGGGTATATCAACGCTCTGGGATCATGGACAGCTGGCATGATCAACGGCTATGGATCCTCCACGACAAACCCTTTGCTTTAA 873 0.4479 MDFSSLQEHVCMESSDHWLQGTIQEESGIMDSSSSSPPLMDRRVRPSPQDQALKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKASSKKSNDVVQTQPELKDLHLTASSNFPDHALQFSHPMGLMAENSRPIEFMETKFGVGINNVMGNVGDVGINADHTNNYGYNNGFLAPNFQGFGGNMSYFDGFNGSGGTYNTIDSSFRLNEDQNIVGAIHDVKPNPKLLSLEWQDHHACFDAGKEPLGYINALGSWTAGMINGYGSSTTNPLL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0783 290 ProSiteProfiles Zinc finger Dof-type profile. 53 107 IPR003851 GO:0003677|GO:0006355
Dere03g0783 290 ProSitePatterns Zinc finger Dof-type signature. 55 91 IPR003851 GO:0003677|GO:0006355
Dere03g0783 290 MobiDBLite consensus disorder prediction 28 52 - -
Dere03g0783 290 Pfam Dof domain, zinc finger 50 107 IPR003851 GO:0003677|GO:0006355
Dere03g0783 290 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 41 142 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0783 Dere-ChrDere03 12359366 12360472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0783 1 163 C2C2-Dof Transcription Factor Family AT5G62940 46.305 8.81e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere03g0783 zf-Dof 1.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0783 03 12359366 12360472 Dere14g0582 14 6111492 6112901 PCT