Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2815 ATGGCCGAAGTGCAGAACGGCCAAGACAGTCAAGGGATTAAGCTGTTCGGAGCTACGATCACGTTGCATACTGGAAGACAGGTGGTGAAAGACGTGGATCAGAAATGCGGCGAGGATCGGACGGCGGAGAAGAGGCCCGACAAGATACTACCGTGTCCGAGGTGCAAGAGCATGGAGACCAAGTTTTGTTACTTCAACAATTACAACGTTAATCAGCCTAGGCATTTCTGTAAGGGGTGCCAGAGGTACTGGACCGCCGGCGGCGCACTCCGGAACGTGCCGGTAGGCGCCGGCCGGCGGAAGGCCAAGCCGCTGTGCCGTGGGGCTGCTGGGTTGTCGGAGGGATGTGGCTATGAGGAGTCCGTCGACGGCGGCCACCGCCAGTTTGAGATGGATGAAGGGTTGAATATTGTGGACGAGTGGCATGCTGCGATGGCTCAGGGTGATTTCCGGCAGCTTTTGCCTGCGAAACGGCGGAGAAACGCCTTGGGCGGTCAACCTCTTTAA 507 0.5779 MAEVQNGQDSQGIKLFGATITLHTGRQVVKDVDQKCGEDRTAEKRPDKILPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKPLCRGAAGLSEGCGYEESVDGGHRQFEMDEGLNIVDEWHAAMAQGDFRQLLPAKRRRNALGGQPL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2815 168 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
Dere02g2815 168 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
Dere02g2815 168 PANTHER CYCLIC DOF FACTOR 2 35 103 IPR045174 GO:0003700|GO:0006355
Dere02g2815 168 Pfam Dof domain, zinc finger 47 103 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2815 Dere-ChrDere02 31707090 31707596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2815 8 166 C2C2-Dof Transcription Factor Family AT1G29160 57.955 3.52e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere02g2815 zf-Dof 1.6e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2815 02 31707090 31707596 Dere02g2815 02 31707090 31707596 ECH