Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2623 ATGGGTTTGAGTTCTAAGCAGGTTTCGAATAGCGGGATTGATTGGAACCAGACGTTACTGCAAGATCAAAACTTGGAGCTTCCAAAGCCTCCATTGATGAGGAAACTGCAACAACAGCAGCAGCGACAACAATCTCAGCAATCGTCAGAGCCTTTAAAGTGTCCGAGGTGTGATTCTACGAACACCAAGTTCTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGAACCTGCAAGAGGCACTGGACTAAAGGTGGCACCTTGCGCAATGTCCCCGTCGGCGGTGGCCGGAAAAACAAACGGGTCAAGAAATCATCCACTCCCAACTCTTCCACCACCGGCGCCGCCGCCGCCGCCGCCACCACCTTAACCTCCGGTGGTGGTGGGTTGAGCACCCACATGGCAATTCAAACTCCCCTACAAAGGCAGAGTACTCTTCCTCTTCCTCCTTCCTCTGCCTCTCTCTATCAATCTCTGATTCATCCTCCACGACAACAGTCCTTGCTGCTACATCAGAATCTGATGAACCCCAGAGACTTACAAAGTAAAGATTTTGGTGTCGGTGTCAGTAATGGTAATGGCAGCTTCTTGAGTTCGGCTCTGCCTCTTCTTCCTCAAAATCAGAGCTTTGTCCTCCCCTTCTCCAGCTCGACCTCTTTTGACACTAACCCATGTTCTGTTCCAACCTCTTTGAGATCCTCAAGTGTTTACAATAATAACTTTGGGGAAGAATTGAAGACGATGGAAGAACCAACCCCAACACAGACACAGCCGTGGGAGATACCTTCAACAAGCGCAGGCAATATGGAAATGTCAAGCTATTGGAGTTGGGAGGACATCGATTCGTTGGTCTCAACTGATCTCAATGTTCCCTGGGATGATTCTGATTTAAAACCCTGA 912 0.4879 MGLSSKQVSNSGIDWNQTLLQDQNLELPKPPLMRKLQQQQQRQQSQQSSEPLKCPRCDSTNTKFCYYNNYNKSQPRHFCRTCKRHWTKGGTLRNVPVGGGRKNKRVKKSSTPNSSTTGAAAAAATTLTSGGGGLSTHMAIQTPLQRQSTLPLPPSSASLYQSLIHPPRQQSLLLHQNLMNPRDLQSKDFGVGVSNGNGSFLSSALPLLPQNQSFVLPFSSSTSFDTNPCSVPTSLRSSSVYNNNFGEELKTMEEPTPTQTQPWEIPSTSAGNMEMSSYWSWEDIDSLVSTDLNVPWDDSDLKP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2623 303 MobiDBLite consensus disorder prediction 90 122 - -
Dere02g2623 303 ProSitePatterns Zinc finger Dof-type signature. 54 90 IPR003851 GO:0003677|GO:0006355
Dere02g2623 303 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 38 233 IPR045174 GO:0003700|GO:0006355
Dere02g2623 303 Pfam Dof domain, zinc finger 51 104 IPR003851 GO:0003677|GO:0006355
Dere02g2623 303 ProSiteProfiles Zinc finger Dof-type profile. 52 106 IPR003851 GO:0003677|GO:0006355
Dere02g2623 303 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2623 Dere-ChrDere02 29405205 29406116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2623 32 192 C2C2-Dof Transcription Factor Family AT1G51700 38.788 3.29e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere02g2623 zf-Dof 2.3e-31 No_clan