Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2086 ATGTCGGAAGCCAAAGACCCGGCAATCAAGCTCTTTGGGAAGACGATCCCGGCCCGATCCGAAGGCTCTGTCGGAGCTCCAGCTACATCTCCTGGGAACATTGTTGATGATAGTATTGATCACAATCATGCTTCTCCCACCAACTCATCGCGAGAGTCCAATACAAAGAGGGATGGAGCAGAGCAAGAGACCGGGAAGACGCATTTAGATGAATTCTCAGGTACTTGGTTAATCTGCCAGTTTAGATCAACATACTTAGCTGACGCTTTGGGAGAAAAACCAATTGAGAATAAAAAGGAAGATGGTGCCCCCACTCAATCTACAGAAGAGTTCACTAATCCAAATGCATCCCCGAGGACAGGTGAAGAATCTATTACACCCTCCATTGAGAAGGACGCTACTACATTGAAGGCTTCAAAATCTGAAGAAGAACAGAGTGAGACAAGTAATTCACAGGAGAAGACTTTGAAAAAGCCAGATAAAATACTGCCCTGCCCCCGCTGCAACAGCATGGACACCAAGTTTTGCTACTACAACAATTACAATGTCAACCAGCCCCGCCACTTCTGCAAGAACTGTCAGAGATACTGGACTGCTGGTGGAACCATGAGGAATGTGCCTGTTGGTGCTGGTCGTCGGAAGAACAAGAACTCTGTTTCTCACTATCGCCAAATAACTGTCAGTGAAGCACTCCAGACTGCTCGAACAGACTTGCCAAATGGAGTACATCATCCTTCCTTGAAGCCAAATGGCACAGTGCTGACATTTGGGTCTGATACACCTTTGTGTGAATCAATGGCATCTATTTTGAACCTTGCTGATAAAACAATGCATTACTGCACAAGAAATGGATTTCATAGCCCAAAAGAACTAAAAATTTCAGTTCCCTATGCCTGTGACGAGAAAGGGAATGATCATTCCAATAAATCTTCTGTGATGTCGACAAAGCCAATGGAAGATACAAGCATCAACAGGCCCCAAGAACAAGTTATGCAGAATTGTCAGATTTTCCCACCTCAAGTTCCTTACTATCCTGGAGCTCCTTGGCCTTTCCCTTGGAATCCAGCGCAATGGAGCTCTCCTGTACCCCCACCTGCATTTTGCACTCCAGGATTTACCATGCCATTCCATCCCGCAGCAGCATATTGGGGTTGTACTGTATCAGGTGCATGGAACATCCCATGGCTGCCACAACCAACATCACCAAACAGTGCAGGCCCTAATTCGCCAACCCTGGGTAAACATTCAAGGGAAGAAAACTTGCTCAAGGTAAATGATTCAGGGGGAGAGGATGAATTTAGCAAAGAAAATAATAAAGAGAAGTGCCTTTGGGTTCCAAAAACATTGAGGATTGATGACCCAGGCGAAGCAGCTAAAAGCTCCATATGGACAACACTGGGGATTAAGAATGATAAGGCTGATTCAATTCAAGAGGGAGGACTCTTTAAGGCATTTCCATCCAAAGGTGATGAAAAAGATCATTCAACACAAAGCTCAACAGTCTTGCAGGCCAATCCAGCTGCATTATCAAGGTCACTCAACTTTCATGAGACCTCAAGAGCAGAGTATTTGTTCTTCCCGCATTCCCCTGGAGGAGAAGGAACCTTCTTGTATTTGTTGAGTTATTCACCTTTCTTAAATGTTGAAGCTCTTGTCCTCGTTGACCAAGCAACTCTACTTTTGGTAGGTAGGAAGAGAAATCAAGTTCGGAATGCAGTTTTGAAGAGAACCAATGCATGTGATACCCTTGAAATTTCCCGTGTTTTCCCTTGCATTTTTGAATCCTTGTTGTATCCTTTCGTCATAAGCGTCCTGGGGATAAAGACTGTGCATGTTTATCTTCACCAGTTTCTTCGATACACATTTCTAAAACCCTGCAAGAATGATGGGTCGATCACGTTTTCTCGCGGTTCTCTTTGTTTCGTCTCTGCTCTTTCTCTCATTCACCCACGAGTGCTGACGGAGACGGTTGAGCATGAACATTCTACTGCTAAAGCGGAGGCAGAGGAAAATTCTGGAAAATCGAGGGTAATGATAGAAGTGATGGATTATGGAGACCCTGAGGCAAACACTAATCCCAAATACGGATATCTTATCAGCCCTCCTTCTTCACCTACAGTCAGTCCCTCTCCGTCCTAA 2139 0.4483 MSEAKDPAIKLFGKTIPARSEGSVGAPATSPGNIVDDSIDHNHASPTNSSRESNTKRDGAEQETGKTHLDEFSGTWLICQFRSTYLADALGEKPIENKKEDGAPTQSTEEFTNPNASPRTGEESITPSIEKDATTLKASKSEEEQSETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSVSHYRQITVSEALQTARTDLPNGVHHPSLKPNGTVLTFGSDTPLCESMASILNLADKTMHYCTRNGFHSPKELKISVPYACDEKGNDHSNKSSVMSTKPMEDTSINRPQEQVMQNCQIFPPQVPYYPGAPWPFPWNPAQWSSPVPPPAFCTPGFTMPFHPAAAYWGCTVSGAWNIPWLPQPTSPNSAGPNSPTLGKHSREENLLKVNDSGGEDEFSKENNKEKCLWVPKTLRIDDPGEAAKSSIWTTLGIKNDKADSIQEGGLFKAFPSKGDEKDHSTQSSTVLQANPAALSRSLNFHETSRAEYLFFPHSPGGEGTFLYLLSYSPFLNVEALVLVDQATLLLVGRKRNQVRNAVLKRTNACDTLEISRVFPCIFESLLYPFVISVLGIKTVHVYLHQFLRYTFLKPCKNDGSITFSRGSLCFVSALSLIHPRVLTETVEHEHSTAKAEAEENSGKSRVMIEVMDYGDPEANTNPKYGYLISPPSSPTVSPSPS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2086 712 MobiDBLite consensus disorder prediction 96 162 - -
Dere02g2086 712 MobiDBLite consensus disorder prediction 1 68 - -
Dere02g2086 712 MobiDBLite consensus disorder prediction 106 134 - -
Dere02g2086 712 ProSiteProfiles Zinc finger Dof-type profile. 163 217 IPR003851 GO:0003677|GO:0006355
Dere02g2086 712 PANTHER CYCLIC DOF FACTOR 2 1 519 IPR045174 GO:0003700|GO:0006355
Dere02g2086 712 MobiDBLite consensus disorder prediction 692 712 - -
Dere02g2086 712 MobiDBLite consensus disorder prediction 54 68 - -
Dere02g2086 712 MobiDBLite consensus disorder prediction 398 417 - -
Dere02g2086 712 MobiDBLite consensus disorder prediction 135 161 - -
Dere02g2086 712 Pfam Dof domain, zinc finger 160 217 IPR003851 GO:0003677|GO:0006355
Dere02g2086 712 ProSitePatterns Zinc finger Dof-type signature. 165 201 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2086 Dere-ChrDere02 21417115 21424360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2086 124 519 C2C2-Dof Transcription Factor Family AT5G39660 50.602 1.85e-113 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere02g2086 zf-Dof 5e-32 No_clan