Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2611 ATGAGGATGGAGAGAGGGTGGAAGCATAGTATAGAGATATCACCAAATTGTCCAAGGTGTGGGTCATGCAACACTAAGTTCTGCTATTACAATAACTACAGCTTGACTCAACCTCGCTACTTTTGCAAAGGCTGCAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAATGTCCCTGTTGGTGGTGGCTGCAGGAGGCACAGGCGCCCTACTAATAAGACTTTAAGACACTCAGCTCTCCCTTCACCTAATGATGCTAATAACCCACCTGCCCATTCTCATGATCTCTCAATTATTCCATCTTCTAGCTCCTCAGTGGCGTCTGATCATGCTCCAAATATTGATGTTGCACTAATTTATGCAAATTTTCTCAATCAAAACCCAGATTCAAGCGAGAAGCCACATCACCAATTCATGCAAACACTAGTTTTGGATCCTTGTGTAGAGTATTCGAGTCTCTCCAATACAGTTTTTGGCCTTACTGAACCATCCACTGTTGAATCCCACTTCAATGTTGAGGGTAACCAAATGTGTTTCGGAGGGTTATTTAACTCCATGCAGGAGCAGAAGGAGGACAGAATAATTGATACTACCAATTTTGAGCTACCACCATTACCAGGTGAAGAGGCAACCCCACATGATGATATCATGATGTGGTCCGATTCTCATGATGAGATGGCCTTGCAAGCGCCATTACCACCACTTCTTGGACCTCAACCTCATGATGCCCACCACCTGTTAATGGGTACTTGGGATGTTTCTTTTCCCAGGCCTTGA 777 0.4505 MRMERGWKHSIEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRRHRRPTNKTLRHSALPSPNDANNPPAHSHDLSIIPSSSSSVASDHAPNIDVALIYANFLNQNPDSSEKPHHQFMQTLVLDPCVEYSSLSNTVFGLTEPSTVESHFNVEGNQMCFGGLFNSMQEQKEDRIIDTTNFELPPLPGEEATPHDDIMMWSDSHDEMALQAPLPPLLGPQPHDAHHLLMGTWDVSFPRP 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2611 258 MobiDBLite consensus disorder prediction 75 104 - -
Dere01g2611 258 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 164 IPR045174 GO:0003700|GO:0006355
Dere01g2611 258 ProSiteProfiles Zinc finger Dof-type profile. 15 69 IPR003851 GO:0003677|GO:0006355
Dere01g2611 258 ProSitePatterns Zinc finger Dof-type signature. 17 53 IPR003851 GO:0003677|GO:0006355
Dere01g2611 258 MobiDBLite consensus disorder prediction 60 104 - -
Dere01g2611 258 Pfam Dof domain, zinc finger 16 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2611 Dere-ChrDere01 40923125 40923901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2611 12 251 C2C2-Dof Transcription Factor Family AT3G52440 39.370 4.81e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dere01g2611 zf-Dof 9.2e-30 No_clan