Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0420 ATGGTAGAAAGAACGATGAGACTTCCATATTGGCCCAGCAGCCTCGTCACCTTCGGCAACTTGGCGTGTTTCATTCTGCTGATCCTCTTCTTCTCTGGGTTCATGGAGTTCAACTTCAACCCCTCTTCCTATTTCTCTCTATCCTCCTCATTCGCCATCTTCAACAGTGGTTCAAAGTCTGATCTTGATCACGATCATCAGGGCTTCACCGATCTGGTGGGTGCCTTCAAGAAGTGGGATTCTGAAGTGGGGTGTGCTGGGTTTATGCAGAAACTGCAGAATTATACCGGGGCTTCGAAAGCTAATGCATCTTTGAAAGAAGAGGTTCATGGTGATGGTGGGGAATCGTGTGAGGGGTTGAAGATGAAGCATGTGAGCGTTCTGGTGAAAGGGTGGAGTTGGATTCCTGATACTTTGAATAACTTGTATTCATGTCGATGTGGTTTGAGCTGTTTGTGGACTAAATCACCTGTTCTTGCGGATAAACCTGATGCTCTCTTGTTTGAAAAGACTAGGCCTCCACTTCTGAGGCATGTTGGAGAACCACTTCGTGTATATATGGATCTTGAAGCTGCAAGAAAAAGAACAGGTCATGAGGATATATTCATCAGTTATCATGCTCAAGATGATATACAGACAACCTATGCTGGTGCCTTCTTCCACAATGATCGAAATTACCACATTTCCTCTCGCAAGAACAGTGGCCCACTTGTTTACTGGTCTTCTTCCCATTGTGTATATCAAAGGAACAAGCTTGCCCACAAGCTGCTCTCCATGCTTCCTCACCATTCCTTCGGCAAGTGCCTCAACAACGTCCATGGCAGAAACAAGGCTCTCGCTCTATACCCTCACTGTGCATCATCTTCTTCTTCTTCTCCAAAATGGTGGGACCACTTACACTGTGCCATGTCTCACTACAAGTTCGTGCTTGCAATAGAGAACACATGGACGCAAAGCTATGTCACAGAGAAGCTGTTCTATGCCCTGGACTCTGGTTCTGTGCCTATCTACTTTGGTGCTTCAAACGTTAAGGACTTTGTGCCTCCACATTCAGTGATCCATGGCTCTGAGTTCAGGACTCTGGAGGATCTGGCTTCGTACGTGAAGGCTCTCGCTAATGACTCTGTGGCTTATGCTGAGTACCACGCTTGGAGGAGATGTGGTGTGCTGGGTAACTATGGCAGAACAAGAGCTCTTAGCCTTGATACCTTGCCTTGCAGGCTTTGTGAAGCTGTTAGCAGAAAAGGAGGAAGAAATGCAGGCACAAGTTGA 1272 0.467 MVERTMRLPYWPSSLVTFGNLACFILLILFFSGFMEFNFNPSSYFSLSSSFAIFNSGSKSDLDHDHQGFTDLVGAFKKWDSEVGCAGFMQKLQNYTGASKANASLKEEVHGDGGESCEGLKMKHVSVLVKGWSWIPDTLNNLYSCRCGLSCLWTKSPVLADKPDALLFEKTRPPLLRHVGEPLRVYMDLEAARKRTGHEDIFISYHAQDDIQTTYAGAFFHNDRNYHISSRKNSGPLVYWSSSHCVYQRNKLAHKLLSMLPHHSFGKCLNNVHGRNKALALYPHCASSSSSSPKWWDHLHCAMSHYKFVLAIENTWTQSYVTEKLFYALDSGSVPIYFGASNVKDFVPPHSVIHGSEFRTLEDLASYVKALANDSVAYAEYHAWRRCGVLGNYGRTRALSLDTLPCRLCEAVSRKGGRNAGTS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0420 423 FunFam Alpha-(1,4)-fucosyltransferase 184 390 - -
Dere01g0420 423 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 237 415 IPR001503 GO:0006486|GO:0008417|GO:0016020
Dere01g0420 423 Gene3D - 182 389 IPR038577 -
Dere01g0420 423 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 94 414 IPR001503 GO:0006486|GO:0008417|GO:0016020
Dere01g0420 423 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 116 414 - -
Dere01g0420 423 PIRSF FucT_plant 11 423 IPR017177 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0420 Dere-ChrDere01 9271884 9278248 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0420 24 422 Xyloglucan Fucosyltransferase1 AT1G71990 64.160 0.0 533