Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0418 ATGGGAAAGGGAAGGCTAGCCATTAGTCTTGTATTATTACGATCAAGCCTCTTTCTCTGCTTTCTCTCTCTTTACAGTAGAGAGAGAGATAGTGCATATCCCATTCCGGATCCTGCCCCCTCCACCATGTCAGCGAAACCCATTAACACCGTCACCATCGCATTAATACTGGGTTTCAGTTTCTTCGTACTCTTCTTCTCCGGTTTTCTCCCGTTTCCGTCGGGATCGCCCTCACTCCAACCTCTCAATGATCGCATTTCTTCAGGGGTCAGGGCGACGCCAGAACCCTTCGATGATCTGGTGGATGCCTTCAGAAAATGGGATTCTCAGGTGGGTTGTTCCTCGTTCAAGGAGAGATATGGTGGGACGAAGCTGAATAAGTCGAATAGTCCTTCTCCTTTGCAAGAGATTGGCGGTGAATCGGAATGTGCGGGCTTGAAATTGAACCACGTCAGCGTTTTGGTGAAAGGGTGGACTTGGATTCCCGATAATTTAGATAATTTGTACTCCTGCCGATGTGGGTTGAGTTGTTTGTGGACTAAATCGTCTGTTCTTGCGGATAAGCCCGACGCTTTATTGTTTGAAACGACTACGCCTCCGATTCGGAGACGCATGGGACAACCACTTTGTGTGTACATGGATCTCGAAGCTGGGAGAAAGCGATCAGGTCGAGAAGATCTATTTATCAGTTATCATGCTGAAGATGATGTCCAGTCAACATATGCTGGTGCTCTGTTTCACAATGGTCGAAACTACCAAATCTCACCTTATAAAAACAAAGATATACTTGTCTATTGGTCTTCATCCCGGTGCCTTTCTCAAAGGAATGAACTTGCCCAGAAACTCCTCCGCGCGCTGCCTCATCATTCATTCGGGAAGTGCCTAAATAATGTTGGTGGTCTGGACGTGGCTCTATCCTTGTACCCTGAGTGTGTGAATGATGCCAACGTTACCCCAAAATGGTGGGATCATTTACATTGTGCCATGTCTCACTATAAATTTGTGCTTGCAATTGAAAACACTTGGACAGAAAGTTATGTGACAGAGAAGTTATTTTATGCCTTAGACTCTGGTGCAGTTCCAATTTATTTTGGAGCACCAAATGTCATGGACTTAGTCCCTCCACATTCCATAATAGATGGTACAAAATTCAGCTCGTTGGAAGAATTGGCTTCTTATGTGAAGGCCCTAGCTAATGATCCAGTGGCATATGCAGAATACCACGCATGGAGAAGGTGTGGTATTTTGGGTAACTACCAAAAAACCCGGGCAGTGAGCCTTGACACATTACCGTGCCGGTTATGTGAGGCTGTTAGCAGGAAAGGAGGAAGAAATGCAAGAAGCTAG 1347 0.4581 MGKGRLAISLVLLRSSLFLCFLSLYSRERDSAYPIPDPAPSTMSAKPINTVTIALILGFSFFVLFFSGFLPFPSGSPSLQPLNDRISSGVRATPEPFDDLVDAFRKWDSQVGCSSFKERYGGTKLNKSNSPSPLQEIGGESECAGLKLNHVSVLVKGWTWIPDNLDNLYSCRCGLSCLWTKSSVLADKPDALLFETTTPPIRRRMGQPLCVYMDLEAGRKRSGREDLFISYHAEDDVQSTYAGALFHNGRNYQISPYKNKDILVYWSSSRCLSQRNELAQKLLRALPHHSFGKCLNNVGGLDVALSLYPECVNDANVTPKWWDHLHCAMSHYKFVLAIENTWTESYVTEKLFYALDSGAVPIYFGAPNVMDLVPPHSIIDGTKFSSLEELASYVKALANDPVAYAEYHAWRRCGILGNYQKTRAVSLDTLPCRLCEAVSRKGGRNARS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0418 448 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 258 441 IPR001503 GO:0006486|GO:0008417|GO:0016020
Dere01g0418 448 PIRSF FucT_plant 42 448 IPR017177 -
Dere01g0418 448 Gene3D - 215 416 IPR038577 -
Dere01g0418 448 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 150 440 IPR001503 GO:0006486|GO:0008417|GO:0016020
Dere01g0418 448 FunFam Alpha-(1,4)-fucosyltransferase 210 416 - -
Dere01g0418 448 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 143 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0418 Dere-ChrDere01 9264722 9268483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0418 43 446 Xyloglucan Fucosyltransferase1 AT1G71990 67.574 0.0 586