Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01972 ATGATGAAGAAACTCTCACTCTCACCCTCCCATTTGGAAACTAAATGTGCCTTCACTATCTCTTTGATGCGCTTGATGGGTTTCTTCGTCGCTTCTTTCGTCCTCTGCTCTGTAATTTTCTCACTCTCCATTGTTCTTCGAGACCCTCCTTCAGATGCAGCTCTTCGCGAACCTTCCTCACTCACGCCTCTCTTTCAAATCACACAAACTCAACAAGATTTGGACAATGATGCCTCTGATTCTGATGAGTTGCCAAAATCAAAAGATGCACTGCTTGGTGGCCTTCTATCTGCTGGATTTGATGAAAAATCTTGTCTCAGCAGGTATCAGTCAGCCTTGTATCACAAAGAGCTATCAGGAAAGCCTTCTTCTTATCTCATTTCTAGGTTAAGAAAATATGAAGCTCAACACAAAGAATGCGGACCTTATACTGAATCATATAACAAAACAGTGGAAGAACTCAGGTCTGGTAAATTTACCGAGTCCTCAGCTTGTAAATATGTTGTATGGATTTCATTTAGTGGGTTAGGGAATAGGATTTTGACCTTAATTTCTGCGTTTCTTTATGCTCTCCTCACAAACCGTGTTCTATTGGTTGACCCTGGTGTGGATATGATTGATCTCTTTTGTGAGCCGTTTCCAGATACTTCCTGGTTTCTCCCTGCTGATTTTCCTCTTAATGCTCAATTTAATAATTTCAGCCAGAAATCTGATCAATGTTATGGGAAAATGCTGAAAAGTAATTCAGTTACAAATTCCACCGCTTCATCTTTTGTCTACCTTCATATACTCCATGATTACGATGATCATGATAAGCTTTTCTTCTGCGATGAAGAGCAACATTTCCTCCAGAAAGTGCCTTGGCTAATGATGAAATCAGATAATTATTTTATTCCATCTTTATTCTTAATGCCGTCTTTTGAGCAGGAACTCAATGATCTCTTTCCAAATAAGGAAACAGTTTTCCATTTCTTGGGTAGGTATCTGCTCCACCCCACAAACAGTGTGTGGGGACTTGTTGACAGATACTATCAAGCTTATTTAGCTAAAGTTGATGAAAGAGTGGGCATACAAATTAGAGTGTTTGACACGGATCCTGGTCCATTTCAACATGTGTTGGATCAGATCTTAGCTTGTGCTTTGAAGGAGAAACTTTTGCCTGATGTTAATCACCAGCAAGATACTATCAATTCATCTGAAATTCCCAAGACAAAAGCAGTATTGATGACATCCTTAAACTCTGGTTATTTTGAAAAGGTTAGAGACATGTATTGGGAATATCCTACAGTTACAGGAGAAGTGGTTGGCGTTTACCAGCCGAGCCATGAAGGATATCAACAAACACAGAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGTGTTGGTTACTAGCTCATGGTCTACTTTTGGCTACGTTGCTCAGGGGCTTGGAGGTTTAAAACCATGGATTCTGTACAAACCTGAGAATCGAACTGCTCCGGATCCTCCCTGTCGACGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGCAAGGCCAAGAGAGGAACTGACACAGGTGAACTTGTTCCATACGTTAGGCATTGCGAAGATATGAGCTGGGGCCTTAAGCTTGTAGACAGTTATAGTTATAAGTAG 1677 0.4091 MMKKLSLSPSHLETKCAFTISLMRLMGFFVASFVLCSVIFSLSIVLRDPPSDAALREPSSLTPLFQITQTQQDLDNDASDSDELPKSKDALLGGLLSAGFDEKSCLSRYQSALYHKELSGKPSSYLISRLRKYEAQHKECGPYTESYNKTVEELRSGKFTESSACKYVVWISFSGLGNRILTLISAFLYALLTNRVLLVDPGVDMIDLFCEPFPDTSWFLPADFPLNAQFNNFSQKSDQCYGKMLKSNSVTNSTASSFVYLHILHDYDDHDKLFFCDEEQHFLQKVPWLMMKSDNYFIPSLFLMPSFEQELNDLFPNKETVFHFLGRYLLHPTNSVWGLVDRYYQAYLAKVDERVGIQIRVFDTDPGPFQHVLDQILACALKEKLLPDVNHQQDTINSSEIPKTKAVLMTSLNSGYFEKVRDMYWEYPTVTGEVVGVYQPSHEGYQQTQKQMHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPYVRHCEDMSWGLKLVDSYSYK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01972 558 PANTHER FUCOSYLTRANSFERASE 2-RELATED 11 557 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cca11g01972 558 Pfam Xyloglucan fucosyltransferase 75 525 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cca11g01972 558 Gene3D - 162 216 - -
Cca11g01972 558 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 11 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01972 Cca-Chr11 45141303 45143989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01972 23 552 Xyloglucan Fucosyltransferase1 AT2G03220 61.049 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01972 K13681 - gmx:100803305 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01972 11 45141303 45143989 Cca11g01972 11 45141303 45143989 ECH