Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00075 ATGGAACTGAAGTCCATGAGTCGTAGAATGTTCCTTGTTATGTTATTCTTAGCTCATGTGGTTGTTATAATTACTTTGGCGTACCGAAACTTTAGTTTCAGACTTTTGGAGGGGGTTTTGGGAGGCAAAGTACAAGGAGGAACAACTCAGAATATTATTGCTGTGTCGAGAGGAACAATCCAAATTATTGCAAATGAAAGCTTAGGAGGGAAAGAAGGTGGAGTTCAGGATCCGCAAGGGACATCTCAAAATGAACCAAGAACTACAAAAGCAGATGTTGGCTTGAAAACCGCTTCATTGAGAAGTTCACATGCTGTTAATTTTGATGAAAAATTGCTTGGTGGATTGTTAACCTCTGGATTTGATGGAGCATCATGCAAAAGTAGGATGCAGTCCCACTTATACCGCAAAGTTTCTCCTCACAAACCTTCTCCTTATTTGATATCTAAACTACGTAACTACGAAGAGATTCATGCAAGGTGTGGACCTAATAGTAGAGCTTATGATAGAAGCATGAGAGAGATTGAACACTCCAAGAACAATGGTGTCGCTACAATGTGTAAGTACCTTATATGGATTCCTATCAATGGTTTGGGGAACCAAATGATTGGCTTGGCTTCAACGTTTCTTTATGCCATTCTCACTGATCGAGTGCTACTTGTAAAACTTGGGAAAGACAAGCATAGACTATTTTGTGAGCCATTTCTCAACTCAACTTGGATATTGCCCGAGAAGTATCCTTTTTGGAATAGAAAACAAAGCCAAACATATCAAATAATGCTAGAGAAGGAAAAAACTAGCAATTCAACGATGGATTTACCATCAACTCTATTTGTTGATCTACGACGCTATTCCCTTTCTGACCCTGAGAAATTTTTTTACTGTGACCATACTCAAGATCTTCTCCACAAGGTCCCTTTGTTGATTTTGCAATCTGATCAATTCTACGCACCTTCTCTATTCATGACCTCATTTTTCAACGTGGAGATCACCAAAATGTTCCCAAAAAAAGACACCATTTTCCACCATTTGGGTCGCTACCTTTTTCACCCTTCTAATGAGGCATGGGAAAATATCATTGGTTACTATGAGACACACCTGGCCAATGCAAATGAAAGGATAGGCATCCAGATAAGAGTATTTAACCCTGATTCCACACCGCAAGAAGCAATTATGAATCTAGTTTTAAGTTGCACATTAAAGCAAAAGCTACTACCAAAAATAGGTTTGTCAAATCCAATTTCTTCCACGGGGAGAAATCATAGTTTAAAGGCAGTTCTTGTGGTATCTCTATATCCAGAGTATGGAGATAATTTACGGACTATGTATCATAAGAAACCAACAGTTAGTGGGGAAATTATACAAGTTTATCAGCCAAGTCATGAAGGGGAGCAAAAGATAAATGATGATAAGCATAATATGAAAGCCTGGACAGAGATTTATCTACTAAGTATCTGA 1458 0.3841 MELKSMSRRMFLVMLFLAHVVVIITLAYRNFSFRLLEGVLGGKVQGGTTQNIIAVSRGTIQIIANESLGGKEGGVQDPQGTSQNEPRTTKADVGLKTASLRSSHAVNFDEKLLGGLLTSGFDGASCKSRMQSHLYRKVSPHKPSPYLISKLRNYEEIHARCGPNSRAYDRSMREIEHSKNNGVATMCKYLIWIPINGLGNQMIGLASTFLYAILTDRVLLVKLGKDKHRLFCEPFLNSTWILPEKYPFWNRKQSQTYQIMLEKEKTSNSTMDLPSTLFVDLRRYSLSDPEKFFYCDHTQDLLHKVPLLILQSDQFYAPSLFMTSFFNVEITKMFPKKDTIFHHLGRYLFHPSNEAWENIIGYYETHLANANERIGIQIRVFNPDSTPQEAIMNLVLSCTLKQKLLPKIGLSNPISSTGRNHSLKAVLVVSLYPEYGDNLRTMYHKKPTVSGEIIQVYQPSHEGEQKINDDKHNMKAWTEIYLLSI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00075 485 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 5 485 - -
Cca11g00075 485 MobiDBLite consensus disorder prediction 70 90 - -
Cca11g00075 485 Pfam Xyloglucan fucosyltransferase 93 484 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cca11g00075 485 Gene3D - 184 238 - -
Cca11g00075 485 MobiDBLite consensus disorder prediction 76 90 - -
Cca11g00075 485 PANTHER FUCOSYLTRANSFERASE 2-RELATED 5 485 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00075 Cca-Chr11 831083 833880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00075 110 485 Xyloglucan Fucosyltransferase1 AT2G03220 47.273 4.63e-120 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00075 K13681 - gmx:100818288 617.076