Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01848 ATGGTCCAAGAAAAGAAACTAGTGGATGAGGTCTCCGGTTGGCTCAAAATCTACGACGACGGTTCAGTGAACCGGACATGGTCCGGCCCGGACCAATTCAAGTTCATGGCCGAACCGGTACCTCCTCACGAACAATTCGTGGACGGAGTCGCCACCCGTGACGTCATAGCTCACGATGGCTCCGGCCACCGTGTCCGCCTTTACCTGCCGGAGAAGGCCCCGAAAGACAACCAAAAGCTGCCAATTCTCCTCCATTTCCACGGCGGCGGCTTTTGCATCAGTGAACCGGACTGGTTCATGTACTATAATGTCTACACCCGGTTCGCCCGGTCCACCCGGTCCATTGTTGTGTCTCCATTTCTCCGCCGTAGCCCGGAGCACCGCCTCCCTGCCGCCATCGATGACGCCTTCGAGACCCTCTTGTGGCTTCAGTCCGTGGCCCGGTCCGGTTCACGCGAACCGTGGCTCGAGCAACACGCGGACTTCGACCGGGTTTTCCTCATAGGAGACAGCTCGGGCGGGAATGTGGTGCATGAGGTGGCTGCGCGGGCCGGTTCGGTTGACATGAGCCCGGTTCGGGTCGCGGGAGCAATCCCGGTTCACCCCGGTTATGTTCGGTCGAACCGGAGCCGGTCCGAGATGGAGATGCCGCAGACGCCGTTTTTAACGTTGGACATGCTGGACAAATTTTTAACATTGGCGCTGCCGGTCGGGGCCACCAAGGACCACCCCATAACATGCCCGATGGGTGCGGCGGCGCCGCCACTGGAAGGGCTGAAACTTCCGCCGGTGCTGATGTGCGTGGCGGAGATGGACTTGATCAGGGACACGGAGATGGAGTACTATGAGGCATTGAAGAAGGCCAACAAAGATGTGGAACTTTTTGTTAGCATTGGGATGACACATAGTTTTTATCTCAATAAGATTGCTGTTGATTTGGATCCCAACGTTGGTGCCCAAACTGAGGCTCTCATTTGCAAGGTCAAGGACTTCATTGAGAAGCACTGA 1008 0.5704 MVQEKKLVDEVSGWLKIYDDGSVNRTWSGPDQFKFMAEPVPPHEQFVDGVATRDVIAHDGSGHRVRLYLPEKAPKDNQKLPILLHFHGGGFCISEPDWFMYYNVYTRFARSTRSIVVSPFLRRSPEHRLPAAIDDAFETLLWLQSVARSGSREPWLEQHADFDRVFLIGDSSGGNVVHEVAARAGSVDMSPVRVAGAIPVHPGYVRSNRSRSEMEMPQTPFLTLDMLDKFLTLALPVGATKDHPITCPMGAAAPPLEGLKLPPVLMCVAEMDLIRDTEMEYYEALKKANKDVELFVSIGMTHSFYLNKIAVDLDPNVGAQTEALICKVKDFIEKH 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01848 335 PANTHER CELL DEATH ASSOCIATED PROTEIN 3 332 - -
Cca10g01848 335 PANTHER ARYLACETAMIDE DEACETYLASE 3 332 - -
Cca10g01848 335 SUPERFAMILY alpha/beta-Hydrolases 6 333 IPR029058 -
Cca10g01848 335 Gene3D alpha/beta hydrolase 5 333 IPR029058 -
Cca10g01848 335 Pfam alpha/beta hydrolase fold 83 305 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01848 Cca-Chr10 34701750 34703019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01848 7 335 Carbohydrate Esterase AT1G68620 33.433 7.49e-53 175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01848 10 34701750 34703019 Cca10g01848 10 34701750 34703019 ECH
Cca10g01848 10 34701750 34703019 Cca04g01778 04 32097783 32098862 PCT