Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01822 ATGGATTGGTACTATGGGAGTGGCGTTAATGATTATCTAGTTCCCAGAGATCAGGATTTATTGGACAGGCATCCTTCACCAGACTATTGGTCAAACTGGGGAATAAGTGCAACTGAAGGTTTTAATTCACCTAAAAACTTTTTTATCATGGATTTCTTTGAAGAAAGATTCAATAATCAAATTGAGCTTGAACCATCTCTGCATGATAAAGACCAGTCTAGCAGTTCAAGTGTATGTGGGGGATTGCCTGAGCAATCTTTTCATCAGACATCACTTTCATGTGATCATCCTAATTACCAGCTTCAAGATCTACCAAGATTCCAACCGTTGAATGACGCTTTCTTGGATTCTGTACCTGAAGATCTGCCGCATGTTGATGTTGAAAACCTAGACAAATCCACTAACATTTCTCCTGGAAACCAATGCAGCAGTACACCTGGTATATTGCAGAATGATATTACAGCTTCAAAGTCAGTTTCAAGCAACTCAGAATCAAAGGATTGCATGCATATAGAGTTACCACTGGCCAAGGTTTTGGACTCATTTGAGGATTGCAACAAAGATGATGATGGTACACATGAGCAGTCATCGCTAGAGGAATTCATACTGAAGGATCTTGAGATGGTAATTGGACAGTTCACTGACAGGACCCGCATTTGCTTCCGAGATGCCCTGTATCGTCTTGCTAGAAATACTGAACAGCAACATACAATGTTGGACCATGATGAAGAGCTTAACATACAGAAGGAAAAACCACATGCAGATCAAAATGAAGCAATGAGGAGGTCTCAGGACAAGAAACCAATGGAATCGGAAACCAACAATATTGACAGAATCATTGCACATCTCATGTTCAAGAGCATGGAGTTTAACATACATGATCCTCCACTTACATCATCAATAAGCTCCATGCAACAAGTTATTGCAAGTAAAGATGTACATCAAAATAATTCAAAAGCTTTGACTGTGGCAGAGAAGCCTTGCTATTCCCACCCCCAAAAATTACCTGTAGATGGTGTGATTCCAAAGTTTGGACTAAGTAACCAACCAAGGGACACAGGTTCATACATTGGATGTGAAGATCCTACAAAGAAATCTTTTATGATGGGCTTTGATTAG 1119 0.3986 MDWYYGSGVNDYLVPRDQDLLDRHPSPDYWSNWGISATEGFNSPKNFFIMDFFEERFNNQIELEPSLHDKDQSSSSSVCGGLPEQSFHQTSLSCDHPNYQLQDLPRFQPLNDAFLDSVPEDLPHVDVENLDKSTNISPGNQCSSTPGILQNDITASKSVSSNSESKDCMHIELPLAKVLDSFEDCNKDDDGTHEQSSLEEFILKDLEMVIGQFTDRTRICFRDALYRLARNTEQQHTMLDHDEELNIQKEKPHADQNEAMRRSQDKKPMESETNNIDRIIAHLMFKSMEFNIHDPPLTSSISSMQQVIASKDVHQNNSKALTVAEKPCYSHPQKLPVDGVIPKFGLSNQPRDTGSYIGCEDPTKKSFMMGFD 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01822 372 MobiDBLite consensus disorder prediction 240 273 - -
Cca10g01822 372 PANTHER PROTEIN LNK4 1 145 - -
Cca10g01822 372 PANTHER PROTEIN LNK4 149 326 - -
Cca10g01822 372 PANTHER PROTEIN LNK1 1 145 IPR039928 GO:0006355|GO:0007623
Cca10g01822 372 PANTHER PROTEIN LNK1 149 326 IPR039928 GO:0006355|GO:0007623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01822 Cca-Chr10 34192759 34196526 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01822 10 34192759 34196526 Cca10g01822 10 34192759 34196526 ECH
Cca10g01822 10 34192759 34196526 Cca04g01797 04 32890631 32894930 PCT