Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01758 ATGGCTACGCTGATTGCTCCTTCCAACCACTCTCCTGTGGAAGATGCTGAATCTATCCGAAAGGCTGTCAAAGGTTGGGGAGCTGATGGAAAAGCCATTATATCAATACTAGGCCATAGAAATGCTACCCAAAGGACCCAAATCAGAGAAGCATACCACAATCTCTTCCAAGAGGACCTCATCAAACGCCTTGAATCTGAGCTCTCTGGTGACTTTGAAAGAGCCATGTACCGTTGGATATGGGAACCTGCAGAACGTGAGGCTTTGTTGGCCAATTTAGCTCTCAAGAGTGCTGACAAAAACTACCAAGTGATAGTGGAAATTTCCTGTGTCCTTTCACCTGAAGAGCTTTTTGTTGTGAGGCGTGCCTACCACAACAGATACAAGCGTTCCTTGGAGGAAGATGTGGCTGCTAATACCACTGGCCATCTTGGCCGGGCAATATTTGGTCAATTTCTTTTGCAGCTATTGGTAGGGTTGGTGAGCTCATTTAGGTATGGTGGCAGTGAAATTAATGCAAAATTGGCAGAATCTGAAGCTGATGCTCTTCATGAGGCTATCAAAAACAAGAACAAAGGTAATGGAGAAATTATTAGGATCCTTACTACTAGGAGCAAGACCCAACTTGTTGCTACTTTCAACCGCTACAGGGATGATCATGGCATTGCCATCACTAAGAAATTGTCCGATGAAGGGTCTGATGAGTTTCATAAGGCAGCCAATTTAGCCATTAGCTGCATCAATGATCATAAGAAGTATTATGAGAAGGTTCTTCGCAATGCCATGGAAAGTGTTGGAACTGATGAGGAAGCACTGACACGTGTGATTGTGACAAGGGCTGAGAAGGACCTGAAGGAGATCAAAGAGGTCTATTACAAGAGAAACAATGTTCATCTTGAGCATGCAGTGGCCAAGGAAACTTCTGGAGACTACAAGAAGTTCCTCCTTACTTTGATGGGGAAAGAAGACTAA 972 0.4414 MATLIAPSNHSPVEDAESIRKAVKGWGADGKAIISILGHRNATQRTQIREAYHNLFQEDLIKRLESELSGDFERAMYRWIWEPAEREALLANLALKSADKNYQVIVEISCVLSPEELFVVRRAYHNRYKRSLEEDVAANTTGHLGRAIFGQFLLQLLVGLVSSFRYGGSEINAKLAESEADALHEAIKNKNKGNGEIIRILTTRSKTQLVATFNRYRDDHGIAITKKLSDEGSDEFHKAANLAISCINDHKKYYEKVLRNAMESVGTDEEALTRVIVTRAEKDLKEIKEVYYKRNNVHLEHAVAKETSGDYKKFLLTLMGKED 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01758 323 Pfam Annexin 90 148 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 Pfam Annexin 179 239 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 Pfam Annexin 256 318 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 SMART annex3 266 318 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 SMART annex3 191 244 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 Gene3D Annexin 250 323 IPR037104 GO:0005509|GO:0005544
Cca10g01758 323 PANTHER ANNEXIN 6 323 - -
Cca10g01758 323 ProSitePatterns Annexin repeat signature. 266 318 IPR018252 GO:0005509|GO:0005544
Cca10g01758 323 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Cca10g01758 323 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 ProSiteProfiles Annexin repeat profile. 249 320 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 Gene3D Annexin 82 156 IPR037104 GO:0005509|GO:0005544
Cca10g01758 323 ProSiteProfiles Annexin repeat profile. 174 245 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 SUPERFAMILY Annexin 3 322 IPR037104 GO:0005509|GO:0005544
Cca10g01758 323 ProSiteProfiles Annexin repeat profile. 82 162 IPR018502 GO:0005509|GO:0005544
Cca10g01758 323 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Cca10g01758 323 PRINTS Annexin family signature 262 282 IPR001464 GO:0005509|GO:0005544
Cca10g01758 323 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Cca10g01758 323 PRINTS Annexin family signature 306 319 IPR001464 GO:0005509|GO:0005544
Cca10g01758 323 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Cca10g01758 323 Gene3D Annexin 174 248 IPR037104 GO:0005509|GO:0005544
Cca10g01758 323 PANTHER ANNEXIN 6 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01758 Cca-Chr10 32394302 32400968 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01758 10 32394302 32400968 Cca10g01758 10 32394302 32400968 ECH
Cca10g01758 10 32394302 32400968 Cca04g01883 04 35931916 35935110 PCT