Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01529 ATGAAGTATGTGTTGGTGACAGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGTATTGGGCTGATCCTCAAGGCCTGTGGCCTTAGAGTTACCTCTATTAAGATTGATCCCTACCTGAATACTGATGCAGGAACAATGTCTCCTTTCGAGCATGGGGAGGTTTTTGTCTTAGATGATGGTGGTGAGGTTGACCTTGACCTTGGAAATTATGAACGTTTCTTGGACATCAAATTAACCCGTGACAATAACATCACCACTGGAAAAATATACCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTTCAGGTTGTTCCACACATTACAGATGCTATCCAAGAGTGGATAGAACGTGTTGCAAAGATACCAGTTGATGGGAAAGAAGGGCCAGCTGATGTTTGTGTTATTGAATTGGGTGGAACTATAGGGGATATTGAGTCCATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCGCTGGCAACTTCTGTTTGGTTCATGTCAGCCTGGTTCCTATTATCCATGTTGTTGGTGAACCGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTGACCCCTAATCTTCTTGCTTGTCGCAGTTCGAAGGAACTTGATGACAATGTCAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGCTGTCAAACATACTTACTCTCCATGATGTTCCAAATATTTGGCACATTCCTTTGCTATTGAAAGACCAGAAGGCACATGAGGCGATCCTGAAAGCATTAAACTTGCTAGGTGTTGCTGCAGAGCCTAATTTGAAGGAGTGGACTACAAGGACAAAAGTATATGACAGGTGTCATGAACCTGTTAGAATTGCTATGGTGGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTACACGCTTCTGTGGCTCGAAACCGTAAACTTACTGTGGACTGGGTTCCAGCTGGGGATCTTGAAGATGTTACTTATAAAGAGGATCCTAAGGCATATAAAGCTGCTTGGAGTCTTTTAATGGGTGCTAATGGGGTTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTACAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAACATAATGTTCCATTTCTAGGCATTTGCTTGGGGATGCAAATTGCGGTCATTGAGTTTGCACGATCTGTTCTTGGTCTGCGTGATGCTACTAGCACAGAATTTGATCCTGAAGCCAAGACCCCTTGTGTTATATTTATGCCAGAAGGCTCAAAGACTCATATGGGAGGAACTATGCGTCTTGGTTCAAGAAGAACATACTTTGAAGTTGCTGACTGCAAATCCGCAAAATTGTATGGCAATGTGAGCTATGTTGATGAGCGACATCGCCATAGATATGAGGTTAATCCTGACATGATATCACAGCTAGAGAGTGCTGGTCTATCTTTTGTTGGCAAGGATGAAACTGGGAGGCGCATGGAGATAGTTGAATTGCCTAGCCATCCTTTTTTTATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCTAGACCAGGGAAACCTTCTCCACTCTTCTCAGGATTAATAGCAGCAGCAAGTGAACCAAAGAGGACAGTTATGGCAATTAATGGTCATCCCAAGTTAACTAATGGAATGTGTAATGGACACACACCAAAACTGAAAGCACACCAAAATGGAAATGGCTTCAAATCAACCAATGGCTCCTTAAATGATGTATATACCAATGGCAATGGTGTGTATGTGGATGGTAGTTATTAG 1821 0.4289 MKYVLVTGGVVSGLGKGVTASSIGLILKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLVHVSLVPIIHVVGEPKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKAKLAQFCHVPLSNILTLHDVPNIWHIPLLLKDQKAHEAILKALNLLGVAAEPNLKEWTTRTKVYDRCHEPVRIAMVGKYTGLSDAYLSVLKALLHASVARNRKLTVDWVPAGDLEDVTYKEDPKAYKAAWSLLMGANGVLVPGGFGDRGVQGKILAAKYAREHNVPFLGICLGMQIAVIEFARSVLGLRDATSTEFDPEAKTPCVIFMPEGSKTHMGGTMRLGSRRTYFEVADCKSAKLYGNVSYVDERHRHRYEVNPDMISQLESAGLSFVGKDETGRRMEIVELPSHPFFIGVQFHPEFKSRPGKPSPLFSGLIAAASEPKRTVMAINGHPKLTNGMCNGHTPKLKAHQNGNGFKSTNGSLNDVYTNGNGVYVDGSY 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01529 606 Gene3D - 1 292 IPR027417 -
Cca10g01529 606 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Cca10g01529 606 PANTHER CTP SYNTHASE 1 567 - -
Cca10g01529 606 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Cca10g01529 606 SUPERFAMILY Class I glutamine amidotransferase-like 297 548 IPR029062 -
Cca10g01529 606 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Cca10g01529 606 PANTHER CTP SYNTHASE 1 567 IPR004468 GO:0003883|GO:0006221
Cca10g01529 606 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Cca10g01529 606 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Cca10g01529 606 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Cca10g01529 606 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Cca10g01529 606 Gene3D - 295 558 IPR029062 -
Cca10g01529 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01529 Cca-Chr10 24970925 24977895 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01648 04 25930492 25938377 Cca10g01529 10 24970925 24977895 PCT